PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022980940.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 838aa    MW: 92166.4 Da    PI: 5.8286
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022980940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.51.1e-181876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022980940.1 18 KYVRYTPEQVEALERLYYDCPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    5679*****************************************************97 PP
2START181.16.1e-571623692204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++++++l+++s+g  g+++l 
  XP_022980940.1 162 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDWPSWYRDCRAVDVLNALSTGngGTIELL 255
                     7899******************************************************.9999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022980940.1 256 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLY 350
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     ks++  ++k+++a+l+ ++
  XP_022980940.1 351 KSSTLLAQKNTMAALRLLR 369
                     ***************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MMAVTSSCKD AASMDNGKYV RYTPEQVEAL ERLYYDCPKP SSMRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKES SRLQTVNRKL TAMNRLLMEE NDRLQKQVSQ LVYENSYFRQ  120
QTQNATLATT DTSCESVVTS GQQNLTPPHP PKDASPAGLL SIAEETLAEF LSKATGTAVE  180
WVQMPGMKPG PDSIGIVAIS HGCTGVAARA CGLVGLEPTR VAEILKDWPS WYRDCRAVDV  240
LNALSTGNGG TIELLYMQLY APTTLAPARD FWLLRYTSVL EDGSLVVCER SLNNTQNGPS  300
MPPVQNFVRA EMLPSGYLIR PCEGGGSIIH IVDHMDLDPW SVPEVLRPLY KSSTLLAQKN  360
TMAALRLLRQ ISQEVSQPNG TGWGRRPTAL RALSQRLSRG FNEAVNGFTD EGWSLLENDG  420
IDDVTLLVNM SNAKTMMGAN ISYSNGFPSM SNAVLCAKAS MLLQNVTPAM LIRFLREHRS  480
EWADTSIDAY SAAAIKTGQC GLPGSHAGTF GGQVTLPLAQ TVEHEEFMEV LKFENVGHYR  540
DDMLMSGDIF LLQLCNGVEE NAVGTSAELI FAPIDASFSD DAPILASGFR IIPLDSGMDA  600
SSPNRTLDLA SALDVGPAGN RAAGDYACQS GKSKSVMTIA FQFVFDVHLQ DNVAAMARQY  660
VRSIIASVQK VALALSPSNV GPHANLQTPA GAPEAQTLAR WICQSYRCYM GMDLLKNEGR  720
EPILKSLWHH LDAVMCCSVK ALPNFTFANQ SGLDMLETTL VALQDITLEK IFDDNGKKTL  780
ASEFPRIMQQ GFLCLQGGVC LSSMGRAVSY EKAVAWKVLN EEENAHCICF MFMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein