PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980725.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 196aa MW: 22595.4 Da PI: 7.9483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64.4	2.2e-20	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++++ +G ++Wk+Ia++ g++R++k+c++rw++yl XP_022980725.1 31 KGAWTAEEDQKLAEVISIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYL 78 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.8e-16	84	129	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022980725.1 84 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 129 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MTEEESVKRK VSQVEGDINE AENMRNGGVN KGAWTAEEDQ KLAEVISIHG AKRWKSIAAK 60 AGLNRCGKSC RLRWLNYLRP NIKRGNISDQ EEDLILRLHK LLGNRWSLIA GRLPGRTDNE 120 IKNYWNSHLS KKLNLQSEKE SDILKRKVCK RKVDTGSREE ETSQECENSS NLEYDVDNLF 180 DFSNEGPDLE WMSKFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	8e-55	MYB family protein