PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980672.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CO-like

Protein Properties

Length: 335aa MW: 36793.6 Da PI: 4.4312

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	31.1	4.9e-10	16	59	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C+ +e ++q+ C+ + lC+ C e+H+ H++v XP_022980672.1 16 IICEACETAPAQFICKADAASLCAACDAEIHSAnplarrHQRVA 59 58*****************************6688888899876 PP
2	CCT	70.6	3.9e-24	266	309	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_022980672.1 266 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 309 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MLKTEGNYGG NGWGAIICEA CETAPAQFIC KADAASLCAA CDAEIHSANP LARRHQRVAI 60 SKGAMFPTAE EEEEEEEEEE EEEEATASWL LMNPVKNNSG GSNKNNSNNG LFLFGGEDEE 120 AEEEEYLNFV EFNGNNNGFG NGDEEFEGLK NNYGGGDSVV PIEFEGNKDD QILLQQSYGG 180 VVDASEFFHS SSKPSYSYNN AFLTHAISVS SMEVGVVPES TTTATVSDIS ISNMRPPRGT 240 IDLFSGTTTA AAVVQMPATQ LSPMDREARV LRYREKKKTR KFEKTIRYAS RKAYAETRPR 300 IKGRFAKRTD VEVQLDRKFS NPLTADGGYG IVPFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15850.1	6e-36	CO-like family protein