PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980576.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 485aa MW: 54324.1 Da PI: 6.0725

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.7e-30	240	299	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_022980576.1 240 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 299 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MEIDLSLKID HHKQELNQEH QEHQEQDEQD EHDEHEDYRV PEKKGVDDTE IHVAASTLKV 60 FLPQHNVNVG EISELQMEMD RMKEENKMLR KEVEQTMKDY YDLEMKIAII QQNNLQKKDS 120 HNFLPSHENE NKRVEEPNRE VELGETAKKR RVRSPSKDNE MRESKLGLSL GLNTNNDLEE 180 DNDHKDQEEE TREKSKEHVT SNMKAMQQSK PQRPELQGMA PPHNRKARVS VRARCEAATM 240 NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CLEDMSILIT TYEGTHNHPL 300 PVGATAMAST ASAAASFTLL DSTNLPLPNP QNPNNILNSS SYSANLNHPS TGLLLNLTAN 360 NFYAPVAASS TSAAHNSYYQ SNFQANLFSR PLDGRTWKSA AEENKQPLMG ESVSAIASDP 420 KFRVAVAEAI SSLINKDGNL TAPNSVKRSS FGTEKDGDGG DSGGGNNNWV AQSLSTNESA 480 RAYVT

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MEIDLSLKID HHKQELNQEH QEHQEQDEQD EHDEHEDYRV PEKKGVDDTE IHVAASTLKV  60
FLPQHNVNVG EISELQMEMD RMKEENKMLR KEVEQTMKDY YDLEMKIAII QQNNLQKKDS  120
HNFLPSHENE NKRVEEPNRE VELGETAKKR RVRSPSKDNE MRESKLGLSL GLNTNNDLEE  180
DNDHKDQEEE TREKSKEHVT SNMKAMQQSK PQRPELQGMA PPHNRKARVS VRARCEAATM  240
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CLEDMSILIT TYEGTHNHPL  300
PVGATAMAST ASAAASFTLL DSTNLPLPNP QNPNNILNSS SYSANLNHPS TGLLLNLTAN  360
NFYAPVAASS TSAAHNSYYQ SNFQANLFSR PLDGRTWKSA AEENKQPLMG ESVSAIASDP  420
KFRVAVAEAI SSLINKDGNL TAPNSVKRSS FGTEKDGDGG DSGGGNNNWV AQSLSTNESA  480
RAYVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	5e-69	WRKY family protein