PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980360.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 446aa MW: 49699.8 Da PI: 6.7444

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.8	1.5e-51	28	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat +gyWkatg+d++v XP_022980360.1 28 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSLLDKKYGNGARMNRATCQGYWKATGNDRPVR 121 579***********************99.89**********85348889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vglkktLvf++grap+g++t+Wvmheyrl XP_022980360.1 122 H-DSRIVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 155 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MGSEALTLST PLAPTKPVAA EAAAPTALAP GFRFHPTDEE LVIYYLKRKV CGKSFRFNAI 60 SEVDIYKSEP WDLAGKSRLK SRDQEYYFFS LLDKKYGNGA RMNRATCQGY WKATGNDRPV 120 RHDSRIVGLK KTLVFHSGRA PDGKRTNWVM HEYRLVDEEL EKAGAGTGSS QDAYVLCRVF 180 HKSNIGPPNG HRYAPFIEEE WDDAGSVLIP GEEIADGKIA SYDAQSERNS NSVCAAEGSN 240 NGARDEGKDG IQEKTHFISK DPVISKDPPR NSHNFLFMCK SENLEDYTPP SIIANPKPFP 300 LMKYKRRRQS DLNSEFSKGS ENSSMSNEEL SLSETVTDVT TTSATTPTTK NFLSTLVEYS 360 LLESAEPKAT PAPPPALETS DLSSSVHPSI LKFIQDLQHE IHKTSMERET LKFELLSARA 420 MISILQSRIV VLNKEISDLK SKYDNN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MGSEALTLST PLAPTKPVAA EAAAPTALAP GFRFHPTDEE LVIYYLKRKV CGKSFRFNAI  60
SEVDIYKSEP WDLAGKSRLK SRDQEYYFFS LLDKKYGNGA RMNRATCQGY WKATGNDRPV  120
RHDSRIVGLK KTLVFHSGRA PDGKRTNWVM HEYRLVDEEL EKAGAGTGSS QDAYVLCRVF  180
HKSNIGPPNG HRYAPFIEEE WDDAGSVLIP GEEIADGKIA SYDAQSERNS NSVCAAEGSN  240
NGARDEGKDG IQEKTHFISK DPVISKDPPR NSHNFLFMCK SENLEDYTPP SIIANPKPFP  300
LMKYKRRRQS DLNSEFSKGS ENSSMSNEEL SLSETVTDVT TTSATTPTTK NFLSTLVEYS  360
LLESAEPKAT PAPPPALETS DLSSSVHPSI LKFIQDLQHE IHKTSMERET LKFELLSARA  420
MISILQSRIV VLNKEISDLK SKYDNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	1e-116	NAC family protein