PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980285.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 473aa MW: 52149.2 Da PI: 9.9648

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.2e-24	145	189	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++ep+rCrRtDGKkWRCsr++++ +k+CErH+hrgr+rsrk++e+ XP_022980285.1 145 EPEPWRCRRTDGKKWRCSRTTVPHQKYCERHMHRGRQRSRKPVEA 189 69****************************************997 PP
2	WRC	58.4	1.2e-18	364	403	2	41
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkWRC+r+ ++++k+C H+hrg+++ k XP_022980285.1 364 REPGRCRRTDGKKWRCRRDIIPNQKYCSLHMHRGSKKHLK 403 69********************************877655 PP
3	QLQ	41.9	3.2e-15	88	118	7	37
QLQ 7 QlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 Qlq+L++Q+l+ KyLaa++ vP +Ll++i+k XP_022980285.1 88 QLQELEQQVLIHKYLAAGLRVPTHLLVPIWK 118 *****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEVHPLQSFP SSETGRGLRR RKTDEAATAA MMMKVKKESN QTENDELSAP VSPSINLGLQ 60 IGTNSAGSRN ERTSIVHRSR ESLITVGQLQ ELEQQVLIHK YLAAGLRVPT HLLVPIWKSV 120 ARTLGSNVNV IGFNPVGFDY GSMMEPEPWR CRRTDGKKWR CSRTTVPHQK YCERHMHRGR 180 QRSRKPVEAS ENDSTSKKIM LNNPDREIRC TLDVTTAIPF PHEGAVVPEP KTVSYACTKS 240 ATETITSSMR GASAIGMSCA DATKTIRMIP SSALNTTATC ITTVPSINPT ATTSIPTSYI 300 VNLKDACNMN FRENCIKSRN DIFGRNDINI QKITSPGLGF SPNSVLQVSG CSSSLCDSKI 360 NLEREPGRCR RTDGKKWRCR RDIIPNQKYC SLHMHRGSKK HLKPSQNAPV LAPSAATYGS 420 SLLPTPLEKL EPATPNTNLS MSIQADDKQR HNEARNTASS SSETTITDTT ITA

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEVHPLQSFP SSETGRGLRR RKTDEAATAA MMMKVKKESN QTENDELSAP VSPSINLGLQ  60
IGTNSAGSRN ERTSIVHRSR ESLITVGQLQ ELEQQVLIHK YLAAGLRVPT HLLVPIWKSV  120
ARTLGSNVNV IGFNPVGFDY GSMMEPEPWR CRRTDGKKWR CSRTTVPHQK YCERHMHRGR  180
QRSRKPVEAS ENDSTSKKIM LNNPDREIRC TLDVTTAIPF PHEGAVVPEP KTVSYACTKS  240
ATETITSSMR GASAIGMSCA DATKTIRMIP SSALNTTATC ITTVPSINPT ATTSIPTSYI  300
VNLKDACNMN FRENCIKSRN DIFGRNDINI QKITSPGLGF SPNSVLQVSG CSSSLCDSKI  360
NLEREPGRCR RTDGKKWRCR RDIIPNQKYC SLHMHRGSKK HLKPSQNAPV LAPSAATYGS  420
SLLPTPLEKL EPATPNTNLS MSIQADDKQR HNEARNTASS SSETTITDTT ITA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45480.1	1e-48	GRF family protein