PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022980231.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 742aa    MW: 81455.5 Da    PI: 6.1613
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022980231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53.1e-20120175156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ +qVk+WFqNrR+++k
  XP_022980231.1 120 KKRYHRHTPQQIQELEAMFKECPHPDEKQRLELSRRLSLEIKQVKFWFQNRRTQMK 175
                     688999***********************************************999 PP
2START174.85.3e-552784872205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT.. CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg.. 88 
                     +a++a++elvk+a  eep+W  +   +n++e+ + f+ + +  + +ea+r+s++++  +  l+ +l++ + +W e+++     a+t++vis g  
  XP_022980231.1 278 MALAAMDELVKMANGEEPLWIGEK--LNEEEYSRMFSGGCFggFVSEASRESALLFLHSSALLDTLMEAN-RWVEMFPnliaTATTTDVISGGmg 369
                     6899*******************9..**********66655999**************************.************************ PP

                     ....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
           START  89 ....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                         galqlm aelq lsp+vp R   f+R+++q+ +g+w++vdvS+d+ ++ + s+++ R   lpSg+li++++ng+skvtwveh +++++++h
  XP_022980231.1 370 gtrnGALQLMHAELQILSPMVPvRQLNFLRFCKQHAEGVWTVVDVSIDPITDTS-SPPCRR---LPSGCLIHDMPNGYSKVTWVEHSEYDESQIH 460
                     ****************************************************98.888888...******************************* PP

                     HHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 179 wllrslvksglaegaktwvatlqrqce 205
                     +l+r+lv+sgl +ga++w atlqrq e
  XP_022980231.1 461 ELYRPLVRSGLGFGARRWIATLQRQSE 487
                     ************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    
MSSAPRFDSS SAHGGGIGGI GGGHGTLMAS GAIAQPRLVT QSSFSKSMFS SPRLSLALTN  60
IDGFGAGEMI PADVGFEENV RRRRREEEAT DSRSGSDNMD GGGGSGDDLD AAVGDNPRKK  120
KRYHRHTPQQ IQELEAMFKE CPHPDEKQRL ELSRRLSLEI KQVKFWFQNR RTQMKTQLER  180
HENTLLRHEN EKLRTENMAI REAMRSPICS NCGGPAIIGE ISLEEQQLRI ENARLKDELD  240
RVCALAGKFV VRPVPVSPPL EEYGGGMMMM ERCVYLEMAL AAMDELVKMA NGEEPLWIGE  300
KLNEEEYSRM FSGGCFGGFV SEASRESALL FLHSSALLDT LMEANRWVEM FPNLIATATT  360
TDVISGGMGG TRNGALQLMH AELQILSPMV PVRQLNFLRF CKQHAEGVWT VVDVSIDPIT  420
DTSSPPCRRL PSGCLIHDMP NGYSKVTWVE HSEYDESQIH ELYRPLVRSG LGFGARRWIA  480
TLQRQSEALA TLISSPSDHS GISADGRRNM VKLAQRMTAN FCTGVCASTV YKWNKLNTGN  540
NNVGEDVRVM TRKSVEDPGE PPGTVLSAAT SVWVAATAER VFEFLRDERL RSEWDILSNG  600
GPMQEMLHIP KAHHHHHANA VSLLRATQSL NPNQSSMLIL QETCSDASGS LVVYAPVDIP  660
AMQVVMNGGD SAYVALLPSG FAVVPAAEDC GGGSLLTVAF QILVNSLPTD KLTVESVETV  720
NNLISCTVQK IKTALRCHEL ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein