PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979886.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 299aa    MW: 33591.2 Da    PI: 5.7536
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.82.5e-182673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd  l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_022979886.1 26 RGPWTVEEDMTLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYL 73
                     89********************************************97 PP
2Myb_DNA-binding46.11.2e-1479122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++
   XP_022979886.1  79 RGNITLEEQLLILELHCRWGNR-WSKIAQQLP-GRTDNEIKNYWRT 122
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDGNKERRFD NVNLHGGGDD DGDLRRGPWT VEEDMTLINY IANHGDGRWN SLARCAGLKR  60
TGKSCRLRWL NYLRPDVRRG NITLEEQLLI LELHCRWGNR WSKIAQQLPG RTDNEIKNYW  120
RTRVQKHAKQ LKCDVNSKQF KDTLRYLWMP RLVERIQVAA AASTAVDGNR SYESVARPAS  180
AAMMNSGYDF VSTPQVTPSY TSENSSSGGG GGGSTMSDLT DCYNNFSCFP VGYGQEVAPP  240
PLQSQAPGFF NEETLDFQAM EQSSCQWMAA DGGVDTSESL WNAPDAGADY FWFSQQQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.19e-90MYB family protein