PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979798.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 420aa MW: 47421.7 Da PI: 4.8001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.9	1e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk....s 80 lp+G++F+P+d+e++++ L+k g + + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t+ + XP_022979798.1 58 LPRGVKFDPSDQEIIWHLLAKVGIGGSrphpfI---NefiptVFEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITDddfgD 148 799**********888887744444476552...123333577778******.677888899**************555466557 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tg++k+v+ +g ++g+kk++v+y + ++ekt+Wvmh+y+l XP_022979798.1 149 VRWHKTGRTKPVVI-DGVQKGCKKIMVLYMSfaKGGRAEKTNWVMHQYHL 197 88********.99********6522666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MARPSWLVDS NRIATKIKSA SGTNNPRSVE WESNPSRSCP NCRHTIDNSD VAHEWPGLPR 60 GVKFDPSDQE IIWHLLAKVG IGGSRPHPFI NEFIPTVFED DGICYTHPQK LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK ITDDDFGDVR WHKTGRTKPV VIDGVQKGCK KIMVLYMSFA 180 KGGRAEKTNW VMHQYHLGTE EDERDGEYVI SKIFYQQQNV KQGEVIEQEV PEIIDAIKVD 240 PRTPKSATPE PPRVESRCVN VNPEQDSVIT STRDLAEVQP EFEKSDKCDM NKPEGCSDEV 300 IDDDENRIEE EPKWWEGESQ NILDSQQLVE ALSLCDDIFQ SQSPPRDGNA NHHGASGSKS 360 CFSEYAKLGA DDLRKDLEEC QNLVLDPANI ELDTPPEFRL SQLDFGSQES FLAWGGKADE

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MARPSWLVDS NRIATKIKSA SGTNNPRSVE WESNPSRSCP NCRHTIDNSD VAHEWPGLPR  60
GVKFDPSDQE IIWHLLAKVG IGGSRPHPFI NEFIPTVFED DGICYTHPQK LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK ITDDDFGDVR WHKTGRTKPV VIDGVQKGCK KIMVLYMSFA  180
KGGRAEKTNW VMHQYHLGTE EDERDGEYVI SKIFYQQQNV KQGEVIEQEV PEIIDAIKVD  240
PRTPKSATPE PPRVESRCVN VNPEQDSVIT STRDLAEVQP EFEKSDKCDM NKPEGCSDEV  300
IDDDENRIEE EPKWWEGESQ NILDSQQLVE ALSLCDDIFQ SQSPPRDGNA NHHGASGSKS  360
CFSEYAKLGA DDLRKDLEEC QNLVLDPANI ELDTPPEFRL SQLDFGSQES FLAWGGKADE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein