PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979741.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 550aa MW: 59591.8 Da PI: 8.3468

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	4e-09	354	401	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P++ +k Ka +L + ++Y++sLq XP_022979741.1 354 SHSLAERVRREKISKRMKFLQDLVPSC----NKVTGKAVMLDEIINYVQSLQ 401 79**********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MENEFFMNDG CGFSGMEIQP NELNSSGLFT PNWENSMDQS DLFESTLSSI VSSPVNSHAG 60 NVIGGGGGGG DNLMMRELIG RLGSICNSGE ISPHSYIGGT NNNSTNTSCY NTPLNSPPKL 120 NLSSIGGNLI PLHQNLAPFS ADPGFTERAA RFSCFGNRNL AGLNGHLSSN ETLELGAGME 180 SGKLSRVSSN KSFYIGGIGS QMGVQEGEQS PIQKGNSMRI PNKKVLNRFL RSSTPENTGD 240 SPEGSSVSEQ ITSGELGFKG KPEINTRKRK SILTGQAKDL KVAGEKHESN GKKIKPDEAS 300 KKEIDAAKGK AEAKDGSKAL GVANPKQKND NSKPPEPPKD YIHVRAGRGQ ATDSHSLAER 360 VRREKISKRM KFLQDLVPSC NKVTGKAVML DEIINYVQSL QRQVEFLSMK LTTVNPRMDL 420 NMETLLPKDI FKGPGSSSLT VYPMDSSMPA FAYDYQSMHM PPLHSSISNG TEKQFSVASS 480 SDQPRNLSAQ IPSGYNEVGN GIQISKFWED ELHTVVQMGY GQNQLQISNG KINTENHRIC 540 SYLGLIRSLN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MENEFFMNDG CGFSGMEIQP NELNSSGLFT PNWENSMDQS DLFESTLSSI VSSPVNSHAG  60
NVIGGGGGGG DNLMMRELIG RLGSICNSGE ISPHSYIGGT NNNSTNTSCY NTPLNSPPKL  120
NLSSIGGNLI PLHQNLAPFS ADPGFTERAA RFSCFGNRNL AGLNGHLSSN ETLELGAGME  180
SGKLSRVSSN KSFYIGGIGS QMGVQEGEQS PIQKGNSMRI PNKKVLNRFL RSSTPENTGD  240
SPEGSSVSEQ ITSGELGFKG KPEINTRKRK SILTGQAKDL KVAGEKHESN GKKIKPDEAS  300
KKEIDAAKGK AEAKDGSKAL GVANPKQKND NSKPPEPPKD YIHVRAGRGQ ATDSHSLAER  360
VRREKISKRM KFLQDLVPSC NKVTGKAVML DEIINYVQSL QRQVEFLSMK LTTVNPRMDL  420
NMETLLPKDI FKGPGSSSLT VYPMDSSMPA FAYDYQSMHM PPLHSSISNG TEKQFSVASS  480
SDQPRNLSAQ IPSGYNEVGN GIQISKFWED ELHTVVQMGY GQNQLQISNG KINTENHRIC  540
SYLGLIRSLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	271	TRKRKS
2	267	295	RKRKSILTGQAKDLKVAGEKHESNGKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	6e-60	bHLH family protein