PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979626.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 246aa MW: 28157.8 Da PI: 8.5824

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	8.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+ +vk++G +W++ ++ g+ R++k+c++rw +yl XP_022979626.1 14 KGPWTTEEDQILISYVKKHGHSNWRALPKLAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+ + ++++lG++ W++Ia++++ gRt++++k++w+++l XP_022979626.1 67 RGNFTLQEQNMVLLLHEKLGNR-WSAIAAELP-GRTDNEIKNFWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MVRAPCCEKM GLKKGPWTTE EDQILISYVK KHGHSNWRAL PKLAGLLRCG KSCRLRWINY 60 LRPGVKRGNF TLQEQNMVLL LHEKLGNRWS AIAAELPGRT DNEIKNFWHT HLKKRVVYKQ 120 SQVYEKKSAD SAIVEAKSKS QKLDFSNHYE LPSSSFDPSP LTNSPTGCNE IQSEQHIEIF 180 EAFHRTCGGR WPEEPSTANF NGAFNSSTVN DEERDQWPSF RAMEDSMEFW YSVFVKAGGS 240 PTDPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-71	MYB family protein