PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979533.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 278aa    MW: 30949.7 Da    PI: 8.0808
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74.2e-18130184256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq  +Lee F+++++++ +++  LA++l+L  rqV vWFqNrRa+ k
  XP_022979533.1 130 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALARQLNLRPRQVEVWFQNRRARTK 184
                     788899***********************************************98 PP
2HD-ZIP_I/II127.55.6e-41130219191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlskeq+ +LEe+F+e+++L+p++K +lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+ en+rL+kev+eLr +l
  XP_022979533.1 130 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELR-AL 219
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGGRDDELRL TLSLGLGVPT RPSFQPTHIH RPSHSMHNHI RNGSWNELFQ FSDRNADSRS  60
FLRGIDVNRL PTVVDGEEEN GVSSPNSTVS SISGKRSERE AEAEAEAEAE RASCSQGSDD  120
EDGGGGDASR KKLRLSKEQS MVLEETFKEH NTLNPKQKLA LARQLNLRPR QVEVWFQNRR  180
ARTKLKQTEV DCEYLKRCCE NLTGENRRLQ KEVQELRALK LSPQLYMHMN PPTTLTMCPQ  240
CERVAVSSSS STTCHPAAAA GVQRPSMPIK PMGGGVAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129135SRKKLRL
2179187RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44910.14e-83HD-ZIP family protein