PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979311.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 231aa    MW: 26618.6 Da    PI: 5.1211
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.51.3e-192780356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +R++f++eq++ Le+ Fe+++ +  +++ +LA +lgL  rqV +WFqN+Ra++k
  XP_022979311.1 27 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWK 80
                    699**************************************************9 PP
2HD-ZIP_I/II120.11.2e-3827118293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ++rr+s+eq+k+LE+ Fe+e++Lep++K +la eLgl+prqva+WFqn+RAR+k+kqlE+dy++L+++y++l+++ e+L+ke+++L+ +l++
  XP_022979311.1  27 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLEQDYSVLRANYNTLVSRFEALKKEKQALAIQLQK 118
                     589************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MLNDDDAEYS PPESMAEAFG MRKKGMNRRR FSEEQIKSLE SIFESESRLE PRKKLQLAGE  60
LGLHPRQVAI WFQNKRARWK SKQLEQDYSV LRANYNTLVS RFEALKKEKQ ALAIQLQKLN  120
DLVQRSMEET ESCRGGLSLE TIDGKSENGH RTKYESEVKP CVSAEEKSEH ELEVLSNYGS  180
GTKEAYLGLE EPQFREPAQG SLISTPNWSN LESEGLFSQS NTNGQWWDFW S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.13e-60HD-ZIP family protein