PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979290.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 756aa    MW: 84723.8 Da    PI: 6.6391
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.5e-2195150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++LAk lgL+ rqVk+WFqNrR++ k
  XP_022979290.1  95 RKKYHRHTNEQIREMEALFKESPHPDEKQRQQLAKLLGLSSRQVKFWFQNRRTQIK 150
                     7999************************************************9877 PP
2START191.44.4e-602664906206
                     HHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   6 aaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     a++el ++a+a++ +Wv+s+    e++n+de+l++f  ++         ++ea+r++++v+m++ +lv++++d + qW+e+++    ka+t++vi
  XP_022979290.1 266 ALEELKTMAAAGDSLWVLSVetgrEILNYDEYLKTFHLNNDsnrswlkTHIEASRETALVFMEPSRLVQSFMDEN-QWKEMFPfmisKAATVDVI 359
                     788999******************************87766999*******************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE...EEEE-E CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv...twvehv 170
                     ++g      ga+qlm+ae q+l+plv+ R+ +f+R+++ql a++w+ivdvS+++ ++++ + s+v+ +++pSg++i+++ ngh+kv   t+veh 
  XP_022979290.1 360 CNGgianwdGAVQLMFAEVQMLTPLVStREMYFIRHCKQLDAERWAIVDVSIENVEDNNIDVSLVKYRKRPSGCIIKDEFNGHCKVflvTMVEHL 454
                     **********************************************************99************************9544489**** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++ +h+l+r l+++g  +gak+w+atlq qce+
  XP_022979290.1 455 ECQKNKVHNLFRNLINNGGGFGAKRWMATLQLQCER 490
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MGADMSDNNN RLAFTKDFFS SPALSLTLAG IFRRGEAGEK GDVEMEEVDD GRDDMTTAVE  60
VSSENSGPVR SRSDDDYDGG GVHEENEDGC HGKRRKKYHR HTNEQIREME ALFKESPHPD  120
EKQRQQLAKL LGLSSRQVKF WFQNRRTQIK AIQERHENTL FXEMEKLRDE NKGMREIFKR  180
KLGCPNCGTT DVAATATTTE QLRIKNAKLK VEIEKLRAAL GKHRHAAVSL SYSSENEQET  240
NQSCLDYYTG IFRLEKSRIM EKVHQALEEL KTMAAAGDSL WVLSVETGRE ILNYDEYLKT  300
FHLNNDSNRS WLKTHIEASR ETALVFMEPS RLVQSFMDEN QWKEMFPFMI SKAATVDVIC  360
NGGIANWDGA VQLMFAEVQM LTPLVSTREM YFIRHCKQLD AERWAIVDVS IENVEDNNID  420
VSLVKYRKRP SGCIIKDEFN GHCKVFLVTM VEHLECQKNK VHNLFRNLIN NGGGFGAKRW  480
MATLQLQCER LAFFMATNIP MKDSTGVATL AGRKSTLKLA QRMSSSFSQA IAASSYQTWT  540
KVVGKTGEDI RVCSRKNPSD LGEPIGAILC SVSSLWLPVS PHLLFHFLRD QACRHQWDVM  600
FGGDEAKSIA NLAKGQDRGN SVTIQTIGSK ESSSSMWILQ DSSTNSSESM VVYSGVDVTG  660
MQSVMTGCDS SSLTILPSGF SILPDGAVSR PPLLITRQKD DKTADTNGGV LLTAAVQILT  720
DASPSAKHTM ESVEYVKNII SCTLKNIKTS MSCEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein