PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979227.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 772aa MW: 84417.7 Da PI: 5.0823

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5.3e-16	480	517	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022979227.1 480 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNK 517 689**********************************8 PP
2	TCR	50.4	4.3e-16	565	603	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+Clk+YCeC++ g+ Cs +C+Ce+C+N XP_022979227.1 565 RHKRGCNCKKSNCLKRYCECYQGGVGCSISCRCEGCRNA 603 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MLEQPIYLAD MDTPERNQIG TTAVPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS 60 SLPSVFTSPH TSSYKESRFL RRRCYSDLSR PDFSSENGNK GVTGNVDELQ VNSSAPDDKS 120 ESSTKLSSEP QALKSHSSRP DCDRPLLDSE DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT 180 EEKEGTSYDW ESLITEGADL FIFSSPNGSE AIRLVQRPLD LVTGFPSSTL AQMMENDNAN 240 LSRMRIADPI ESSGGQHEIE FSSSRAGEGC ELKDMDQAID DGISFPTSSD SMSREITDDE 300 VARYIADDCM PVSNLHRGMR RRCLDFEAAV SRRKNMEDGS NGCSVSTHPE EKTTSMDKQL 360 VPYKSGGVAT RYVLTGIGLH LNALATTSKD AKNLNHERFS SERQLNLPNS GGLCHSSSTG 420 LDPLSTSIVT EQDMDPSGSG VQSEEDAAMA SAYVLADDFN QNSPKKKRRR LEHAGETESS 480 CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIY EDTVLATRKQ IESRNPLAFA 540 PKVIRNSDSL PEPGDESNKT PASARHKRGC NCKKSNCLKR YCECYQGGVG CSISCRCEGC 600 RNAFGRKDGS SLLGLETELE EEETETNQKS VMDKALQGPE IQNNEEQNPG SATPSTPLQL 660 SRQLVPLPFS AMSNPLRSSF LNVGSSSGFY AGNQLEKSNI LQPQPVKPVS EDEIRNILHG 720 DCSHGAGMKT DSPNSKRISP PQSEFGLSPL PRTGRKLILQ SIPSFPSLTP QH

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MLEQPIYLAD MDTPERNQIG TTAVPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS  60
SLPSVFTSPH TSSYKESRFL RRRCYSDLSR PDFSSENGNK GVTGNVDELQ VNSSAPDDKS  120
ESSTKLSSEP QALKSHSSRP DCDRPLLDSE DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT  180
EEKEGTSYDW ESLITEGADL FIFSSPNGSE AIRLVQRPLD LVTGFPSSTL AQMMENDNAN  240
LSRMRIADPI ESSGGQHEIE FSSSRAGEGC ELKDMDQAID DGISFPTSSD SMSREITDDE  300
VARYIADDCM PVSNLHRGMR RRCLDFEAAV SRRKNMEDGS NGCSVSTHPE EKTTSMDKQL  360
VPYKSGGVAT RYVLTGIGLH LNALATTSKD AKNLNHERFS SERQLNLPNS GGLCHSSSTG  420
LDPLSTSIVT EQDMDPSGSG VQSEEDAAMA SAYVLADDFN QNSPKKKRRR LEHAGETESS  480
CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIY EDTVLATRKQ IESRNPLAFA  540
PKVIRNSDSL PEPGDESNKT PASARHKRGC NCKKSNCLKR YCECYQGGVG CSISCRCEGC  600
RNAFGRKDGS SLLGLETELE EEETETNQKS VMDKALQGPE IQNNEEQNPG SATPSTPLQL  660
SRQLVPLPFS AMSNPLRSSF LNVGSSSGFY AGNQLEKSNI LQPQPVKPVS EDEIRNILHG  720
DCSHGAGMKT DSPNSKRISP PQSEFGLSPL PRTGRKLILQ SIPSFPSLTP QH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	464	471	PKKKRRRL
2	465	470	KKKRRR
3	467	471	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-129	CPP family protein