PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979144.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 281aa MW: 33118.4 Da PI: 6.7554

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83	1.9e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr+g++KK +ELSvLCda++ +i+fss+gkl+ y++ XP_022979144.1 10 RIENRTTRQVTFSKRRAGVFKKTHELSVLCDAQIGLIVFSSNGKLFQYCT 59 8***********************************************96 PP
2	K-box	54.4	5.3e-19	84	172	11	99
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e+l++ l+ ++k ++ Lq ++ ++ ed ++ +l++L+ +e++L++sl ++R++K+ell +q+++l++kek+l++en+++ + ++ XP_022979144.1 84 MNHPEELERRLRIMRKDTDDLQLSLQRYTAEDFSTFQLRDLHDIENRLQNSLDRVRARKSELLQQQVDNLRRKEKMLEDENEQIYHLIK 172 5678999999************************************************************************9988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MGRGKIAIRR IENRTTRQVT FSKRRAGVFK KTHELSVLCD AQIGLIVFSS NGKLFQYCTQ 60 PACMDQIIRR YQIAVGNPIP EQNMNHPEEL ERRLRIMRKD TDDLQLSLQR YTAEDFSTFQ 120 LRDLHDIENR LQNSLDRVRA RKSELLQQQV DNLRRKEKML EDENEQIYHL IKEQQMAMEE 180 QQVVAMMQKR RSDDVEDEQV VNMDGDDGFG FDNSSNDIHP HLQLQLQHYH QHQHQHHHEP 240 SSVLQLAPLP SPPPPPPFLP YRLQPFQPNL QDINLHSSTY E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23260.2	2e-48	MIKC_MADS family protein