PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979090.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 721aa    MW: 79670.4 Da    PI: 6.5822
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.2e-2062117156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +r+  ++t++q++e+e++F+++++p+ ++r +L+++lgL+  qVk+WFqN+R+++k
  XP_022979090.1  62 KRRYNRHTHHQIQEMEAFFKECPHPDDKQRMDLSRELGLEPLQVKFWFQNKRTQMK 117
                     688899***********************************************998 PP
2START180.69e-572414612206
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                     la + ++el ++a+a+ep+Wv          +n++e+l+ f  +++       +++ea+r+s++v+m++ +l+ +l+d   qW++ +     +a+
  XP_022979090.1 241 LAVSGMEELSRMAQAGEPLWVPADtksseVVLNETEYLSCF--GGTvgpkplgFRTEASRVSAIVFMNHIKLMDILMDAT-QWSTVFCgivsRAS 332
                     5677799*************976666667889999999999..44468**********************9999999999.******99999*** PP

                     EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
           START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                     t++v+s+g      gal+lm+ae+q++splvp R+ +fvRy++q+g+g+wv++dvS+d  ++ +    + R +++pSg+li++++ng+sk+twve
  XP_022979090.1 333 TVDVLSPGlpgnfnGALHLMSAEFQVPSPLVPtRENYFVRYCKQQGDGVWVVADVSLDTLRPCS----MPRTRRRPSGCLIQQLPNGYSKITWVE 423
                     ************************************************************9976....89999********************** PP

                     -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     h++ ++  ++ ++r+l +sgla+gak+wvatl+rq e+
  XP_022979090.1 424 HFEADETGVPTMYRPLFNSGLAFGAKRWVATLDRQSER 461
                     **********************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MFDPDMFHTL HPHPHHHMFD MAFNTSGNEL EHVRDDDFES KSGPEITFEP PCESDHQQRS  60
KKRRYNRHTH HQIQEMEAFF KECPHPDDKQ RMDLSRELGL EPLQVKFWFQ NKRTQMKAQQ  120
ERHENAILKA ENEKLRAENT RYREAFAHST CPNCGSSATA LGEMSFDDQH LRIENSRLRD  180
EIERMSGYGL KSTKSVPSSY YHLPSNAPQS SGFVGEMYGA CDFLRSISRP SEADKPIIVE  240
LAVSGMEELS RMAQAGEPLW VPADTKSSEV VLNETEYLSC FGGTVGPKPL GFRTEASRVS  300
AIVFMNHIKL MDILMDATQW STVFCGIVSR ASTVDVLSPG LPGNFNGALH LMSAEFQVPS  360
PLVPTRENYF VRYCKQQGDG VWVVADVSLD TLRPCSMPRT RRRPSGCLIQ QLPNGYSKIT  420
WVEHFEADET GVPTMYRPLF NSGLAFGAKR WVATLDRQSE RFATSIATSI STGDLRVISS  480
IDGRKSMLKL AERMVTSFCA GVGASSVHAW TALPIAAGDD VRVVTRKSTD EPGRPPGVVL  540
SAATSFWIPV PPKVVFDFLR KEKSRSEWDI LSNGGLVQEM AHIANGRHSG NCVSLLRVNS  600
ANSSQSNMLI LQESCTDSTG SYVIYAPVDT VAMNVVLTGC DPDYVALLPS GFAILPDGPA  660
GANGGEILEL GSGGSLITVA FQILVDSVPT ARLSIGSVAT VNSLIKCTVE RIRAAVMREK  720
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein