PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978945.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 618aa MW: 66486.4 Da PI: 7.1544

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	351	409	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_022978945.1 351 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 409 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MDKGWGLTMR DSDQSIGFLS HNPSPLTLNS FHTMFRATDF PVKLSRSDDN DAPPPPADDN 60 RFVVNEVDFF SDNKRVVDNH EDQDAKPSAN ILATALVNKD DKVSSATGTA FNRVNTGLHL 120 LTANTGSDQS STVDDGISSD GDDKRAKNEL AQLQMELQRM KAENHKLRDM LTHVSNNYST 180 LQMHFFTLLQ QNQASQPGHE PEIGEKKSRE LKQEGGRAVV PRQFMNLGPS GNTAEMDELS 240 NSSSDERTRS GSPLNNNNNN NNNNSESASK KSSARDHLEI AAPSDQGNSN FRDAKRSIPR 300 EESSESESHG WGPNKAPRFN SSTKPLEQST EATMRKARVS VRARSEAPMI SDGCQWRKYG 360 QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST 420 TTAAATMLLS GSMSSADHNL MNPNLLARAI LPCSSSMATI SASAPFPTIT LDLTQTPNPL 480 QFQRPAAAPF HLPFPGGQPP LAAAQVLGQP LYNQSKFSGL QLSHEMGANS PHLGHPQIAQ 540 PAPTTQSGGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGAHSNTNS TTTTTTNTTT 600 NNNNNGNNNS KISSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MDKGWGLTMR DSDQSIGFLS HNPSPLTLNS FHTMFRATDF PVKLSRSDDN DAPPPPADDN  60
RFVVNEVDFF SDNKRVVDNH EDQDAKPSAN ILATALVNKD DKVSSATGTA FNRVNTGLHL  120
LTANTGSDQS STVDDGISSD GDDKRAKNEL AQLQMELQRM KAENHKLRDM LTHVSNNYST  180
LQMHFFTLLQ QNQASQPGHE PEIGEKKSRE LKQEGGRAVV PRQFMNLGPS GNTAEMDELS  240
NSSSDERTRS GSPLNNNNNN NNNNSESASK KSSARDHLEI AAPSDQGNSN FRDAKRSIPR  300
EESSESESHG WGPNKAPRFN SSTKPLEQST EATMRKARVS VRARSEAPMI SDGCQWRKYG  360
QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST  420
TTAAATMLLS GSMSSADHNL MNPNLLARAI LPCSSSMATI SASAPFPTIT LDLTQTPNPL  480
QFQRPAAAPF HLPFPGGQPP LAAAQVLGQP LYNQSKFSGL QLSHEMGANS PHLGHPQIAQ  540
PAPTTQSGGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGAHSNTNS TTTTTTNTTT  600
NNNNNGNNNS KISSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-126	WRKY family protein