PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978921.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 964aa MW: 106523 Da PI: 6.6498

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	7.7e-29	565	616	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022978921.1 565 AEKSISLDVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 616 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MTEPKPDSDH LSPFFPKSHR SGADDRNPLM DFDLDLDIPW PLDQTPLFST SDHLASPLWA 60 FSEADDGDDS KFAAYACSVL GTSNLNSVPQ KPIENHKFKI LPVPSENPDG YCLIKEKMAQ 120 ALRYIKDLSD QQVLAQVWAP VKNGDKVVLS TSGQPFVLDT QSNGLHRYRL VSLTYMFSLD 180 TELDGSLGLP GRVFQQKLPE WTPNVQYYSS KEYSRLRHAL DYNVQGTLAL PVFDPSGQSC 240 LGVLELIMTS PRINYAPEVD KVCKALQAVN LKSSEILDRP NIQICNEGRQ NALAEILAVL 300 TVVCETHNLP LAQTWVPCRH RNVLANGGGL KKSCTSFDGS CMGRICMSAT EVASYVVDAH 360 KWGFREACLE HHLQKGQGVS GRAFSSHSSC FCGDITQFCK NEYPLVHYAL MFGLKSCFSI 420 CLRSKFTGDD EYILEFFLPP SLVDYQEQKT LLGAMMGTMK QHFYTLKVAS GINLEEGGIV 480 EVVQASRNGG FESRLECIHI PPESDAMPNA GEVVALETLQ QRSLMVHDAP KDENNTVRDR 540 ESDNPVPCVQ NKEVKKTSKR KRGKAEKSIS LDVLQQYFAG SLKDAAKSLG VCPTTMKRIC 600 RQHGISRWPS RKINKVNRSL SKLKRVIDSV QGNEGTFGMS SLATSPLPVA VSSSSHPLTP 660 DGSNQNFFFA SQPSDPQCKE TNTSEAQTNN TQARLKDQLL RGVSNPEELF HEQNGSLMKL 720 GNGFNNFRTG SGSRDESTGT PTSHGSCQGS PANESNPLSI HHHEQCVRRG SPEAAAFHPI 780 DKPNKSTRAC PVSDTLLMVE PKEPFGGMLI KDAGSSKDLK NLCASVADAI LDDQVPKFCW 840 PRPSDIAMRQ PMESVCHTVP HISARQEPSR MTIKATYKDD IIRFQISTCT GIVELREEVA 900 KRLKLDVGTF DIKYMDDDRE WVLTACDADL QECVDISKAS GSNIIRLLVH DLSVNLGSSC 960 ESTR

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MTEPKPDSDH LSPFFPKSHR SGADDRNPLM DFDLDLDIPW PLDQTPLFST SDHLASPLWA  60
FSEADDGDDS KFAAYACSVL GTSNLNSVPQ KPIENHKFKI LPVPSENPDG YCLIKEKMAQ  120
ALRYIKDLSD QQVLAQVWAP VKNGDKVVLS TSGQPFVLDT QSNGLHRYRL VSLTYMFSLD  180
TELDGSLGLP GRVFQQKLPE WTPNVQYYSS KEYSRLRHAL DYNVQGTLAL PVFDPSGQSC  240
LGVLELIMTS PRINYAPEVD KVCKALQAVN LKSSEILDRP NIQICNEGRQ NALAEILAVL  300
TVVCETHNLP LAQTWVPCRH RNVLANGGGL KKSCTSFDGS CMGRICMSAT EVASYVVDAH  360
KWGFREACLE HHLQKGQGVS GRAFSSHSSC FCGDITQFCK NEYPLVHYAL MFGLKSCFSI  420
CLRSKFTGDD EYILEFFLPP SLVDYQEQKT LLGAMMGTMK QHFYTLKVAS GINLEEGGIV  480
EVVQASRNGG FESRLECIHI PPESDAMPNA GEVVALETLQ QRSLMVHDAP KDENNTVRDR  540
ESDNPVPCVQ NKEVKKTSKR KRGKAEKSIS LDVLQQYFAG SLKDAAKSLG VCPTTMKRIC  600
RQHGISRWPS RKINKVNRSL SKLKRVIDSV QGNEGTFGMS SLATSPLPVA VSSSSHPLTP  660
DGSNQNFFFA SQPSDPQCKE TNTSEAQTNN TQARLKDQLL RGVSNPEELF HEQNGSLMKL  720
GNGFNNFRTG SGSRDESTGT PTSHGSCQGS PANESNPLSI HHHEQCVRRG SPEAAAFHPI  780
DKPNKSTRAC PVSDTLLMVE PKEPFGGMLI KDAGSSKDLK NLCASVADAI LDDQVPKFCW  840
PRPSDIAMRQ PMESVCHTVP HISARQEPSR MTIKATYKDD IIRFQISTCT GIVELREEVA  900
KRLKLDVGTF DIKYMDDDRE WVLTACDADL QECVDISKAS GSNIIRLLVH DLSVNLGSSC  960
ESTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein