PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978812.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 266aa    MW: 29327.6 Da    PI: 8.2081
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.7e-18117171256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Le+ F+ +++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022978812.1 117 RKKLRLTKEQSALLEDSFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTK 171
                     788899***********************************************98 PP
2HD-ZIP_I/II123.69.5e-40117206191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLE+sF+ +++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++ +l++en++L+ke +eL+ +l
  XP_022978812.1 117 RKKLRLTKEQSALLEDSFKLHSTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCATLTDENRKLQKELQELK-AL 206
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGFDDLSNTG LLLGLGLPLP SNPALLSHKP KKPVDLFSFP APESEPSLTL GLSTPETYPL  60
PAPETADLCR QPSPHSAVSS FSGGRVKRER DVFGEDIEEE KACSRVSDED EDGSIARKKL  120
RLTKEQSALL EDSFKLHSTL NPKQKQALAR ELNLRPRQVE VWFQNRRART KLKQTEVDCE  180
FLKRCCATLT DENRKLQKEL QELKALKLAQ PLIMQMPAAT LTMCPSCERT GGGATAVNAD  240
GNSKSPFSMA LMPRFDKAFT KPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166174RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-80HD-ZIP family protein