PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978746.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Dof
Protein Properties Length: 263aa    MW: 29031.4 Da    PI: 9.8068
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.4e-392582562
          zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ +
  XP_022978746.1 25 ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLK 82
                    789****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MASASRIMDK PRQEQQQQPP PVAPALKCPR CDSSNTKFCY YNNYSLSQPR HFCKACKRYW  60
TRGGTLRNVP VGGGCRKNKR LKSSSSSFSS VNATPTSTPT QKPRLHNNSI NSATNIIPSS  120
PMFFGVHNTN PSPLNLQFST LDSVSGLLNL SPPPFDAIGC GLGFSHIADL RETFNSPKQI  180
QDISIHATHF HPPAISFDRN SQLFGNFEAG LMKEDLNRLS HNQTEQVNPS NFSDPSRFWN  240
SATTATSNWH DPTNNGSSIA SLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-36Dof family protein