PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978621.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 631aa MW: 69432 Da PI: 7.6567

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	291	350	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022978621.1 291 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 350 78*****************988886678446***********************98 PP
2	AP2	46.9	6.7e-15	393	444	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022978621.1 393 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 444 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MNNVNGNNCD WLGFSVSPNV SMELSSSSAT AVSSSIPANL FHSPSQFNYG ICYGVDGESG 60 GFYSPLSAMP LKSDGSICSM ESLSRQHPQV ASSSTPKLED FFGGATMVSH HYESNGREAM 120 ALSLDSIFCH QNPTHEPNNQ PYGHFSSLRS REGVLQDSKV ILPDGCNLQQ QQQHPPAVIE 180 TKNSGLNWAV PRIYAVANNG SFEQKMVSFM SENGGESGPM NAMAYGDLHS LSLSMTMSPS 240 SQSSCVTATQ HASPALADCS AMDTKKRGHE KLDQKQIVHR KSLDTFGQRT SQYRGVTRHR 300 WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA YDLAALKYWG PSTHINSPVE 360 NYQKELEEMK NMSRQEYVAH LRRRSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL 420 YLGTFSTQEE AAEAYDIAAI KFRGMNAVTN FNITRYDVER IIASNTLLSG DLAKRKQQPE 480 FDNESLRQTP PTHNSNSEAL HLPSQGNQSE SEWKMALYQS SSQQLIPKPR LPSAITDDGS 540 QLGVEDSARM GAHFSNASSI VTSCSFSSSR EESPDKTSLS MVFGMPQSTS KPFATSGSSN 600 MNSSSWIASA QQLRAANCMS QLPVFAAWSD S

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MNNVNGNNCD WLGFSVSPNV SMELSSSSAT AVSSSIPANL FHSPSQFNYG ICYGVDGESG  60
GFYSPLSAMP LKSDGSICSM ESLSRQHPQV ASSSTPKLED FFGGATMVSH HYESNGREAM  120
ALSLDSIFCH QNPTHEPNNQ PYGHFSSLRS REGVLQDSKV ILPDGCNLQQ QQQHPPAVIE  180
TKNSGLNWAV PRIYAVANNG SFEQKMVSFM SENGGESGPM NAMAYGDLHS LSLSMTMSPS  240
SQSSCVTATQ HASPALADCS AMDTKKRGHE KLDQKQIVHR KSLDTFGQRT SQYRGVTRHR  300
WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA YDLAALKYWG PSTHINSPVE  360
NYQKELEEMK NMSRQEYVAH LRRRSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL  420
YLGTFSTQEE AAEAYDIAAI KFRGMNAVTN FNITRYDVER IIASNTLLSG DLAKRKQQPE  480
FDNESLRQTP PTHNSNSEAL HLPSQGNQSE SEWKMALYQS SSQQLIPKPR LPSAITDDGS  540
QLGVEDSARM GAHFSNASSI VTSCSFSSSR EESPDKTSLS MVFGMPQSTS KPFATSGSSN  600
MNSSSWIASA QQLRAANCMS QLPVFAAWSD S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-145	AP2 family protein