PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978528.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 288aa MW: 33092.7 Da PI: 4.525

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58	1.6e-18	20	73	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA +lgL+ rqV vWFqNrRa++k XP_022978528.1 20 KKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWK 73 456899***********************************************9 PP
2	HD-ZIP_I/II	127.1	7.6e-41	19	111	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLep+rKv+la eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++y++lk++ ++L+k+++ L +e+ke XP_022978528.1 19 EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKE 111 69**************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MLDGLDEEGS MEEQCHVGEK KRRLSVDQVK ALEKTFEIEN KLEPDRKVKL ALELGLQPRQ 60 VAVWFQNRRA RWKTKQLERD YGLLKANYET LKRSFDTLQK DNDGLLKEIK ELKLKLEEEK 120 TERHLSVKEE IFVPESGNLL IEQTNNHLSV DHVPLPVSSD HSDDFNYESF RIASAEDGDE 180 QRVKVSLFPD FKDGSSDSDS SAILNEDNSP NAVVSSTAAG MLQSKQQILS SPTSSLNWFP 240 YQKAAAYNNA QQYVKIEEYN FFSGEESCDL FSDEQAPSMH WYCPDEWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	49	KKRRLSVDQVKALEKTFEIENKLEPDRKVK
2	68	76	RRARWKTKQ
3	89	94	ETLKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	7e-55	HD-ZIP family protein