PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 325aa MW: 37157.1 Da PI: 4.6533 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.9e-18 | 57 | 110 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA +lgL+ rqV vWFqNrRa++k XP_022978526.1 57 KKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWK 110 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 126.8 | 9.7e-41 | 56 | 148 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLep+rKv+la eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++y++lk++ ++L+k+++ L +e+ke XP_022978526.1 56 EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKE 148 69**************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MKRHGSSDSL GALMSVCPTS DEQSPRNSHV YGREFQSMLD GLDEEGSMEE QCHVGEKKRR 60 LSVDQVKALE KTFEIENKLE PDRKVKLALE LGLQPRQVAV WFQNRRARWK TKQLERDYGL 120 LKANYETLKR SFDTLQKDND GLLKEIKELK LKLEEEKTER HLSVKEEIFV PESGNLLIEQ 180 TNNHLSVDHV PLPVSSDHSD DFNYESFRIA SAEDGDEQRV KVSLFPDFKD GSSDSDSSAI 240 LNEDNSPNAV VSSTAAGMLQ SKQQILSSPT SSLNWFPYQK AAAYNNAQQY VKIEEYNFFS 300 GEESCDLFSD EQAPSMHWYC PDEWN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 86 | KKRRLSVDQVKALEKTFEIENKLEPDRKVK |
2 | 105 | 113 | RRARWKTKQ |
3 | 126 | 131 | ETLKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 3e-70 | HD-ZIP family protein |