PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978518.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 349aa MW: 38716.8 Da PI: 6.5046

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ ++ +G g+W++ ++ g++R++k+c++rw +yl XP_022978518.1 14 KGPWTPEEDQKLIKHIQNHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.3	1.5e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022978518.1 67 RGKFSPEEEQTILNLHSVLGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGRSPCCDES GLKKGPWTPE EDQKLIKHIQ NHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SPEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DIFSSLPHII ALASLKELME NPSWEEQALR LQAEALQMAK FQYLQFLLQP 180 PPTTSSLTNT TTNNNPTEIE IMNLINSLFE NQMTTPNTNT PLTAPTTLQP LATDSAGLPF 240 SHLPSLEIVP NTTNTYETLP FIAKEMCGQN NEVSGPNNCS WQLPSSSTTP SPPAVDPPLP 300 PLNIIHDGPS SNSNYGDACS TSSFAGSSAS IWPDHLLLED ALFHDIPSL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGRSPCCDES GLKKGPWTPE EDQKLIKHIQ NHGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SPEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHRPRT DIFSSLPHII ALASLKELME NPSWEEQALR LQAEALQMAK FQYLQFLLQP  180
PPTTSSLTNT TTNNNPTEIE IMNLINSLFE NQMTTPNTNT PLTAPTTLQP LATDSAGLPF  240
SHLPSLEIVP NTTNTYETLP FIAKEMCGQN NEVSGPNNCS WQLPSSSTTP SPPAVDPPLP  300
PLNIIHDGPS SNSNYGDACS TSSFAGSSAS IWPDHLLLED ALFHDIPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-100	MYB family protein