PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978463.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 517aa MW: 54737.3 Da PI: 8.6381

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022978463.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	11.2	0.0012	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022978463.1 132 WKCDKCSKKYAVQSDWKAHSKIC 154 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MPADEKDSSM ASGKASVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL FATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSWR DSFIRHRAFC 180 DALAKESSKA QPMPVDKPDL HSDHDGDSQS ASVKPNLEPS PPPPPPPPPP SSPPVSSPPQ 240 TELSENPSQC TEEATSTPGL SRSSSSSSSN NKSASSNSSS RSSGFAGLFA SSMTSRSLQP 300 PRPPGFTDLM QAMACSDRSS DYASSSTIEP TSLGLAMNQG PSIFGTASQD LRQYTPMPQP 360 AMSATALLQK AAQIGATASN ASLLRGLGLV SSPSSLAAQQ ENLPWNHQSH GQPDGISIAA 420 GLGLGRPCDG NSGLKELMIG NHSMFAPKHT TLDFLGLGMA ADGSPNSGLA ALITSVGSSV 480 DIGVTTLSYG GSSVDVGVTT LSYSGSGDIS EKKTESE

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MPADEKDSSM ASGKASVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL FATNRFVCEI  60
CNKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK  120
KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSWR DSFIRHRAFC  180
DALAKESSKA QPMPVDKPDL HSDHDGDSQS ASVKPNLEPS PPPPPPPPPP SSPPVSSPPQ  240
TELSENPSQC TEEATSTPGL SRSSSSSSSN NKSASSNSSS RSSGFAGLFA SSMTSRSLQP  300
PRPPGFTDLM QAMACSDRSS DYASSSTIEP TSLGLAMNQG PSIFGTASQD LRQYTPMPQP  360
AMSATALLQK AAQIGATASN ASLLRGLGLV SSPSSLAAQQ ENLPWNHQSH GQPDGISIAA  420
GLGLGRPCDG NSGLKELMIG NHSMFAPKHT TLDFLGLGMA ADGSPNSGLA ALITSVGSSV  480
DIGVTTLSYG GSSVDVGVTT LSYSGSGDIS EKKTESE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-103	C2H2 family protein