PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 842aa MW: 92197.2 Da PI: 5.8308 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 13 | 71 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le++++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_022978372.1 13 KYVRYTPEQVEALERVYAECPKPSSLKRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 71 6789*****************************************************97 PP | |||||||
2 | START | 161.4 | 6.7e-51 | 161 | 369 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv++ +++g++++ +++ s+++sg a+ra+g+v +++ v+e+l+d++ W ++++ + vi +g g+++l+ XP_022978372.1 161 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRLSWYRDCRCLNVASVIPTGngGTIELI 254 68999*****************************************************.8999999999************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++++a+++l++ Rdf++ Ry+ +l++g+ v++++S++s + p s +vRae+lpSg+li+ +++ +s +++v+h+dl+ ++++++lr+l+ XP_022978372.1 255 YMQTYAPTTLAAaRDFWTMRYTTSLEDGSVVVCERSLTSSTGGPAgppPSTFVRAEMLPSGYLIRACEGDGSIIHIVDHIDLDVWSVPEVLRPLY 349 ***************************************999988887899******************************************** PP HHHHHHHHHHHHHHTXXXXX CS START 186 ksglaegaktwvatlqrqce 205 +s+ + ++k+++a+l++ ++ XP_022978372.1 350 ESSKILAQKMTTAALRHVRQ 369 ***************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 842 aa Download sequence |
MALLMHKEMG SSKYVRYTPE QVEALERVYA ECPKPSSLKR QQLIRECPIL SNIEPKQIKV 60 WFQNRRCREK QRKESSRLQS VNRKLSAMNK LLMEENDRLQ KQVSHLVYEN GYVRQKLSAS 120 GTTTDNSCES VVMSGQPQQQ QNPNPQHPNR DVNNPAGLLA IAEETLAEFL SKATGTAVDW 180 VQMIGMKPGP DSIGIVAVSR NCSGVAARAC GLVSLEPTKV AEILKDRLSW YRDCRCLNVA 240 SVIPTGNGGT IELIYMQTYA PTTLAAARDF WTMRYTTSLE DGSVVVCERS LTSSTGGPAG 300 PPPSTFVRAE MLPSGYLIRA CEGDGSIIHI VDHIDLDVWS VPEVLRPLYE SSKILAQKMT 360 TAALRHVRQI SQETNGEIQY TGGRQPAVLR TFSQKLCRGF NDAVNGFADD GWSPMGSDGL 420 EDVTIVINSS ANMFPGSQYN TSMYPSYGGG VMCAKASMLL QDVPPALLVR FLREHRSEWA 480 DYGVDAYCAA SLKASPYAVP CARPGGFPSS QVILPLASTV EHEEFLEVVR LEGLAFSPDD 540 VALAGRDMYL LQLCSGVDEN AVGACAQLVF APIDESFADD APLLPSGFRV IPLDPKTDDP 600 TAARTLDLAS TLEVGANAAR SAGQTDLSSY NLRSVLTIAF QFTFENHLQE NVAAMARQYV 660 RSVVGSVQRV SMAIAPSRLS SNMGLKPLPG SPEALTLARW ICRSYRIHVG SELLQADSQS 720 GGDAMLKLLW HHSDAIMCCS VKTNASAVFT FANQAGLDML ETTLVGLQDI MLDKILDEAG 780 RKILCTEFPK IMQQGFTNLP SGICISSMGR PISYEQAIAW KVLNDDDSNH CLAFMFINWS 840 FV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 0.0 | HD-ZIP family protein |