PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 34049.7 Da PI: 6.1857 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.1e-09 | 24 | 69 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+eE +++ +a +++ + +W ++a++++ g+t +++ +q XP_022978246.1 24 QWTPEENKRFENALALYDEDtsdRWFKVAAMIP-GKTIGDVIKQYQE 69 6********************************.*********9996 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.9e-15 | 133 | 177 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky XP_022978246.1 133 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 177 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEFLSPASYL QNSNWLFQET KGTQWTPEEN KRFENALALY DEDTSDRWFK VAAMIPGKTI 60 GDVIKQYQEL EEDVSDIEAG LIPIRDYDSS NSFTLERVDS SHGFDGLSHF FGSGFKRGTS 120 TRPSDHERKK GIPWTEEEHR QFLMGLKKYG KGDWRNISRN FVTTRTPTQV ASHAQKYFIR 180 QLSGGKDKRR SSIHDITTVN LPDTKSPLGD NNRHPSPDPA AMAAQLHQLS EMVGSTEQQF 240 DWKSSNQVLD SSNGNMFMVM PSNEPQQQEE NLLKETIHRS AIASYYNIFQ VQPMNYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-112 | MYB family protein |