PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978207.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 353aa MW: 37882.2 Da PI: 5.324

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.3e-17	59	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + XP_022978207.1 59 KGPWSPEEDAILSRLVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 104 79****************************.*********985 PP
2	Myb_DNA-binding	54.8	2.1e-17	111	155	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar + gRt++ +k++w++ XP_022978207.1 111 RKPFTDEEDRIIVAAHAVHGNK-WAAIARLLR-GRTDNAIKNHWNST 155 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEDAAATEVG ASTAEGGGGG VNECDAVASV ADCGSGDEAL PMVGEGETTG GRGGKDRVKG 60 PWSPEEDAIL SRLVSKFGAR NWSLIARGIA GRSGKSCRLR WCNQLDPSVK RKPFTDEEDR 120 IIVAAHAVHG NKWAAIARLL RGRTDNAIKN HWNSTLRRRC TELERIKLES GNVVDDASLE 180 KTKGSSEETL SCGDVNSFKS FEGKDASSRE HMDDQFEDKV PIASEGQFTH EVKEQPTLYR 240 PVARGPLIQA SKPEVEASKL LEGVYGDRSV PHQCGHGCCQ SHNQGSPLDS LLGPEFVDFS 300 EPPLSFPSFE LAAIATDISN LAWLKSGLEN GSVRAMGDSA GRLNGSQMQM GRL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEDAAATEVG ASTAEGGGGG VNECDAVASV ADCGSGDEAL PMVGEGETTG GRGGKDRVKG  60
PWSPEEDAIL SRLVSKFGAR NWSLIARGIA GRSGKSCRLR WCNQLDPSVK RKPFTDEEDR  120
IIVAAHAVHG NKWAAIARLL RGRTDNAIKN HWNSTLRRRC TELERIKLES GNVVDDASLE  180
KTKGSSEETL SCGDVNSFKS FEGKDASSRE HMDDQFEDKV PIASEGQFTH EVKEQPTLYR  240
PVARGPLIQA SKPEVEASKL LEGVYGDRSV PHQCGHGCCQ SHNQGSPLDS LLGPEFVDFS  300
EPPLSFPSFE LAAIATDISN LAWLKSGLEN GSVRAMGDSA GRLNGSQMQM GRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-99	MYB family protein