PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978070.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 368aa MW: 41887.6 Da PI: 7.38

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2e-49	46	171	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_022978070.1 46 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 139 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_022978070.1 140 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 171 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAIAAAASSS STMSHEEISS SNTRDKNNND DNNNCSDDQH EHDVVMPGFR FHPTEEELVE 60 FYLRRKVEGK RFNVELITFL DLYRYDPWEL PALAAIGEKE WFFYVPRDRK YRNGDRPNRV 120 TTSGYWKATG ADRMIRTEDF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERYQ 180 KTEISLCRVY KRAGVEDXPS LPRSLPSRAS SSSRLISSST PKNLHQTSSS STDKFQRFEP 240 QFHHHLQIGT TVETTAADAS ATSSCEEVTT VLGLSKQNPF TSTPLINMAA TSSYTPFFSP 300 SSNNSLDDLQ KLIHFQQQPP PSTPTTLINS LPTPYYQPTL PPPPQLPVVF PDRLWEWNPI 360 PDGVNPFK

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAIAAAASSS STMSHEEISS SNTRDKNNND DNNNCSDDQH EHDVVMPGFR FHPTEEELVE  60
FYLRRKVEGK RFNVELITFL DLYRYDPWEL PALAAIGEKE WFFYVPRDRK YRNGDRPNRV  120
TTSGYWKATG ADRMIRTEDF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPHHETERYQ  180
KTEISLCRVY KRAGVEDXPS LPRSLPSRAS SSSRLISSST PKNLHQTSSS STDKFQRFEP  240
QFHHHLQIGT TVETTAADAS ATSSCEEVTT VLGLSKQNPF TSTPLINMAA TSSYTPFFSP  300
SSNNSLDDLQ KLIHFQQQPP PSTPTTLINS LPTPYYQPTL PPPPQLPVVF PDRLWEWNPI  360
PDGVNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-104	NAC family protein