PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977876.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 355aa MW: 40420.9 Da PI: 5.7939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.8e-19	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl XP_022977876.1 22 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 69 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_022977876.1 75 RGRFSFEEEEAIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 119 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MPALNSYSMG RTPCCEKEGL KKGPWTPEED QKLIDYIQKH GYGNWRTLPK NAGLQRCGKS 60 CRLRWTNYLR PDIKRGRFSF EEEEAIIQLH SILGNKWSAI AARLPGRTDN EIKNYWNTHI 120 RKKLLRMGID PVTHNPRLDV LDLSSILGSS FYNNPNSQIN SFSRLIGIHN RLANSFMSSN 180 NISHFSMQNV ENHEQSNMII SQSQLLPPQQ PHYQIDQSPA LPPLHEASAG CSPSTTTSCG 240 GEAYYSLFPP SNFSDFYSQN CQQQTEELNG FDYSECAQLP NYDFYKQEQE QVHQQVMEPS 300 PETSTLNSSL TPLNSNSTYF STANGNGTDQ DEKESYCSDF FKFEIPDLLD VNPFV

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MPALNSYSMG RTPCCEKEGL KKGPWTPEED QKLIDYIQKH GYGNWRTLPK NAGLQRCGKS  60
CRLRWTNYLR PDIKRGRFSF EEEEAIIQLH SILGNKWSAI AARLPGRTDN EIKNYWNTHI  120
RKKLLRMGID PVTHNPRLDV LDLSSILGSS FYNNPNSQIN SFSRLIGIHN RLANSFMSSN  180
NISHFSMQNV ENHEQSNMII SQSQLLPPQQ PHYQIDQSPA LPPLHEASAG CSPSTTTSCG  240
GEAYYSLFPP SNFSDFYSQN CQQQTEELNG FDYSECAQLP NYDFYKQEQE QVHQQVMEPS  300
PETSTLNSSL TPLNSNSTYF STANGNGTDQ DEKESYCSDF FKFEIPDLLD VNPFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-102	MYB family protein