PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977681.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 224aa    MW: 26101.3 Da    PI: 7.2335
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.91.1e-2061115256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++t+++++qle Le+ F+++ +++ +++ +L+k+lgL+ rq+ +WFqNrRa++k
  XP_022977681.1  61 KNKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWK 115
                     789***************************************************9 PP

2HD-ZIP_I/II111.17.4e-3662150290
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +k +ls +q+++LE+ F+ee kL+p+rK++l++eLglqprq+a+WFqnrRAR+ktkql + y++Lk+++d++++++++L++ev +Lr+ 
  XP_022977681.1  62 NKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLQHLYDTLKQEFDTISNQKHTLQQEVMKLRTM 150
                     799***********************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEWNNGSLTP KLLSPPLLHH QSSYTPCYNY NYTYNLDHFP VLETKKPAEE SVVGGVDQKN  60
KNKTKLSPDQ LESLERRFQE EVKLDPDRKM KLSKELGLQP RQIAIWFQNR RARWKTKQLQ  120
HLYDTLKQEF DTISNQKHTL QQEVMKLRTM LLLREEATRN HQGSMAYTDE EMAESTSVGV  180
RSSTNNYMYN NKVEDLVEIS GSGSGPPPPF WWGAEEDAHR PSYP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110118RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.12e-39HD-ZIP family protein