PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977583.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 521aa MW: 58059.5 Da PI: 5.2779

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.7e-17	157	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022977583.1 157 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 206 78*****************......55**********************997 PP
2	AP2	43.7	6.6e-14	249	299	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022977583.1 249 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 299 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MWDLNDCPDV REGDESEACS SAKTSIEGDG DDDKRKRVGS ASNSSCSAAE EEEEEEEEEE 60 DLEEEEEEEE GSDEVLGSMV MQIDTQTPSP VTRQFFPLED TEIPPPLPLP TTDSAFPRAH 120 WVGVKFGHPD PNNNSINPND LSHPIKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK 180 QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFSIEDYED DLKQMGNLTK EEFVHVLRRQ 240 STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY DKAAIKCNGK 300 EAVTNFDPSI YENSTTNLAD HSLDLRLGNS SSKQNDSPNG SLDPHHSSSA SLPMEADWQR 360 SQGFRPPQLN LLQESSGGGG SGNKNYNNAQ RGNTNRYLES ETMQLLSQTH IQSPISFEMQ 420 RHGQFRRQAG GADQPHSQIL LHNQNHPTFN YQIQFPGSSN GGRIIGSDLS LSLSDHQNQI 480 VESGPSQVLT TAAASSGFSP QIRASKNWLH KNGFHCLIRP S

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MWDLNDCPDV REGDESEACS SAKTSIEGDG DDDKRKRVGS ASNSSCSAAE EEEEEEEEEE  60
DLEEEEEEEE GSDEVLGSMV MQIDTQTPSP VTRQFFPLED TEIPPPLPLP TTDSAFPRAH  120
WVGVKFGHPD PNNNSINPND LSHPIKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK  180
QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFSIEDYED DLKQMGNLTK EEFVHVLRRQ  240
STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY DKAAIKCNGK  300
EAVTNFDPSI YENSTTNLAD HSLDLRLGNS SSKQNDSPNG SLDPHHSSSA SLPMEADWQR  360
SQGFRPPQLN LLQESSGGGG SGNKNYNNAQ RGNTNRYLES ETMQLLSQTH IQSPISFEMQ  420
RHGQFRRQAG GADQPHSQIL LHNQNHPTFN YQIQFPGSSN GGRIIGSDLS LSLSDHQNQI  480
VESGPSQVLT TAAASSGFSP QIRASKNWLH KNGFHCLIRP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-108	AP2 family protein