PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977582.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 526aa MW: 58562 Da PI: 5.1253

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.8e-17	157	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022977582.1 157 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 206 78*****************......55**********************997 PP
2	AP2	43.7	6.7e-14	249	299	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022977582.1 249 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 299 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MWDLNDCPDV REGDESEACS SAKTSIEGDG DDDKRKRVGS ASNSSCSAAE EEEEEEEEEE 60 DLEEEEEEEE GSDEVLGSMV MQIDTQTPSP VTRQFFPLED TEIPPPLPLP TTDSAFPRAH 120 WVGVKFGHPD PNNNSINPND LSHPIKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK 180 QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFSIEDYED DLKQMGNLTK EEFVHVLRRQ 240 STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY DKAAIKCNGK 300 EAVTNFDPSI YESELNPTTD STTNLADHSL DLRLGNSSSK QNDSPNGSLD PHHSSSASLP 360 MEADWQRSQG FRPPQLNLLQ ESSGGGGSGN KNYNNAQRGN TNRYLESETM QLLSQTHIQS 420 PISFEMQRHG QFRRQAGGAD QPHSQILLHN QNHPTFNYQF PGSSNGGRII GSDLSLSLSD 480 HQNQIVESGP SQVLTTAAAS SGFSPQIRAS KNWLHKNGFH CLIRPS

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MWDLNDCPDV REGDESEACS SAKTSIEGDG DDDKRKRVGS ASNSSCSAAE EEEEEEEEEE  60
DLEEEEEEEE GSDEVLGSMV MQIDTQTPSP VTRQFFPLED TEIPPPLPLP TTDSAFPRAH  120
WVGVKFGHPD PNNNSINPND LSHPIKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK  180
QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFSIEDYED DLKQMGNLTK EEFVHVLRRQ  240
STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY DKAAIKCNGK  300
EAVTNFDPSI YESELNPTTD STTNLADHSL DLRLGNSSSK QNDSPNGSLD PHHSSSASLP  360
MEADWQRSQG FRPPQLNLLQ ESSGGGGSGN KNYNNAQRGN TNRYLESETM QLLSQTHIQS  420
PISFEMQRHG QFRRQAGGAD QPHSQILLHN QNHPTFNYQF PGSSNGGRII GSDLSLSLSD  480
HQNQIVESGP SQVLTTAAAS SGFSPQIRAS KNWLHKNGFH CLIRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-111	AP2 family protein