PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977575.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 443aa    MW: 49844.2 Da    PI: 8.986
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3567.2e-187100199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                     ffk+l++ +   +  l++pkkf++++g+    s  ++l+ ++g +W+v l +  + g+++l+kGW +F++   L+ g  +vF+l+gr s+f   v
  XP_022977575.1   7 FFKILLHRNLEDQ-KLMIPKKFVKKYGK--LLSSAVILKLPDGMKWKVGLAMAAN-GSVWLQKGWHKFANHYCLEFGSLLVFRLEGRsSSF--EV 95 
                     7888866555555.5***********84..47889***************65444.579**************************998888..99 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++f+ 
  XP_022977575.1  96 TIFDP 100
                     99885 PP
2B345.81.1e-14153234187
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     f+ vl +s+v  + ++ +p  f +eh +++ +   ++l++  +++W v+l  +++ g + +++GW++F  +ngLk+gD+++F+++g+
  XP_022977575.1 153 FQVVLNQSNVCGRYNMNIPMAFGKEHFSPEMK--YVKLQT-GNKEWMVTL--KQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGS 234
                     778899999999999***********877544..466554.78*******..88888899***********************8775 PP
3B349.38.8e-16243333199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk ++ +d+++++ + +p  f+++ +g+   + + +++d+ g+sW+++l  +k ++ +++++GW  Fv+   Lk gDf++F++dg+ +f   vk
  XP_022977575.1 243 FFKGFI-PDSGSLH-MNIPPAFVKHLNGS--FPEKAIMKDPMGKSWRITL--EKLDDLVYFKNGWPAFVDYYFLKYGDFLIFQYDGHCTF--DVK 329
                     666664.4777777.9*******777777..6668***************..***999***************************98888..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f +
  XP_022977575.1 330 IFGT 333
                     9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MASSPQFFKI LLHRNLEDQK LMIPKKFVKK YGKLLSSAVI LKLPDGMKWK VGLAMAANGS  60
VWLQKGWHKF ANHYCLEFGS LLVFRLEGRS SSFEVTIFDP SGLESEYSSF HVCDSTTESE  120
EDDDSVSDSD DEDYEIIGVA RRRRKSATEK PGFQVVLNQS NVCGRYNMNI PMAFGKEHFS  180
PEMKYVKLQT GNKEWMVTLK QYEGCMRFSG GWRKFYGENG LKDGDTCLFE MHGSTSAASS  240
LEFFKGFIPD SGSLHMNIPP AFVKHLNGSF PEKAIMKDPM GKSWRITLEK LDDLVYFKNG  300
WPAFVDYYFL KYGDFLIFQY DGHCTFDVKI FGTNGCKKAV AAKAASCVPI LEAVAADAAN  360
AVPILKVKEE PVVDKEDAKH SISSKRTRLQ VGSKIVCKPR NIAASNRGRR LPNASNSVEQ  420
VGPSGPFFVR TMSRIRQFIF LDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-21B3 family protein