PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977348.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 599aa    MW: 66790.9 Da    PI: 6.9848
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.81.4e-06122142627
                     -SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   6 CrffartGtCkyGdrCkFaHgp 27 
                     C ff++ G C  GdrC F Hgp
  XP_022977348.1 122 CIFFQK-GLCLKGDRCAFLHGP 142
                     ******.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    
MVGGGPQVLE RPQQSLPQPL SAAEEEAVKR NTDCVYFLAS PLTCKKGSEC EYRHSEYARV  60
NPRDCWFWLN GNCLNPKCSF RHPPLDGLVG TPHSTTPSSQ IPSQTSAIPS APVNSSKQAV  120
SCIFFQKGLC LKGDRCAFLH GPSPVPTNKV HQMATNGQAS EPPSVKKIAG GTQRSNQEKK  180
NPQEIFLKSV GDASVKLAMK DESVPSKIGN INEKSRPLAK VADGGSRKGQ YGWDQRWTSS  240
EKLSLGSAQM ERRLSRKSIS PEHVQNVDLR HRLNKQRRGN GLRSVINNDN VANRPEERNY  300
NASRRDSHPS QESSMSNRLR GRIKLPRIPS PVSSNVGPER DFNRGRPGGR LSPGRSLSLS  360
YQESNRDEMK GRLEVDYNNE RRNFNGLNSG RDGMDETSDF AAPKRLAELK GEKHVVSKEK  420
QTLGKRKGFD NDQPGVELSF EGPKSLSEIL RKKRQVKSAV DLPMNNAERE SSERLKERSS  480
IPSVEQGGLS STSKQKANSL EGIMSAPVET FGKEENINVT HHNSSQPIHS TDDHGIEAYE  540
ETFEDPEYEG DDLRDGEYEY EEVDDREYNY EEGDNVVPEE EYMDDEDGDD FAKKIGVMS