PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022977266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 207aa MW: 23915.7 Da PI: 4.8728 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.4 | 1.6e-20 | 49 | 104 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k+ +++++qle Le++F+++ ++ +++ +L+k+lgL+ rq+ vWFqNrRa+++ XP_022977266.1 49 KKKKNRLSQDQLESLERCFQEDGMLDPDTKMKLSKELGLQPRQIAVWFQNRRARWR 104 789999*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 114.7 | 5.5e-37 | 50 | 140 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk rls++q+++LE++F+e+ L+p+ K++l++eLglqprq+avWFqnrRAR++tkqlE y++Lk+++d++++e+++L++ev +Lr+ l XP_022977266.1 50 KKKNRLSQDQLESLERCFQEDGMLDPDTKMKLSKELGLQPRQIAVWFQNRRARWRTKQLEYLYHTLKQEFDTISKEKHTLQQEVLKLRSML 140 59*************************************************************************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MEWNNGSLIP SPYTSYNYYY NYNYNLDEFP VLEAKKPEVE SVVGGVDEKK KKNRLSQDQL 60 ESLERCFQED GMLDPDTKMK LSKELGLQPR QIAVWFQNRR ARWRTKQLEY LYHTLKQEFD 120 TISKEKHTLQ QEVLKLRSML GEQTMSNEEP MAYEDASGEA TVESTSVGVI GSCNNYTHNN 180 VEDLVKISGS GPPFWWGAEA AHLPSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-39 | HD-ZIP family protein |