PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977221.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 276aa MW: 30983.6 Da PI: 6.6699

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8.3e-13	126	172	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR+++ ++f+ L l+P + K +Ka++L A++Y+k+Lq XP_022977221.1 126 QHVIAERRRREKLSQSFAALSALIPGL-----NKTDKASVLGGAIKYVKELQ 172 699*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MEISSPKWLS ELEMMDCAYQ YEITNYPHDY TLDELNFPTN FPATEKLITS VQLDSISSSQ 60 FISFGDSPEI EKLDCAMGKV ERGKDLSFII PQSLGVNQNR YVIGYEEGHD IKKRATIGRN 120 SGNGQQHVIA ERRRREKLSQ SFAALSALIP GLNKTDKASV LGGAIKYVKE LQERVKWAEE 180 EAGDEEGRVI KSVPKIETRV LERDVLVKIH CKKQKGCFSN ILTQIQKLKL TIVNSCVLPF 240 GHSRLDITII AQMEVGFCMT ATDLGNKLTQ ALVDLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	136	ERRRRE
2	132	137	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-44	bHLH family protein