PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022977087.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 277aa MW: 30054.2 Da PI: 7.385 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.1e-19 | 124 | 178 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F++++ +s +++++LA++l+L rqV vWFqNrRa+ k XP_022977087.1 124 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTK 178 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.9 | 6.7e-39 | 124 | 212 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE++F+e++ L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++lkeen++L+ke +eL+ + XP_022977087.1 124 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCEKLKEENTKLQKELQELK-S 212 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MDADCNAGLL LGLGRGLDHH NSMRPLVPDV AGVKKKLQVL KFDDILPSLT LGLSVVVEKS 60 GGESAADDLI HQGSSGSPAS SFSNSSGFKR ERDGGAGEEP AEAEVFMERI SMKVAEEEED 120 GSPRKKLRLT KEQSAVLEDN FKEHSSLSPK QKQDLARQLN LRPRQVEVWF QNRRARTKLK 180 QTEMDCELLK KCCEKLKEEN TKLQKELQEL KSLKLTAPPF CMQLQAATLT VCPSCESSIC 240 GGGGGGGGAD ASPANTFSIG SKPHFLKFPF NHPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 181 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-45 | HD-ZIP family protein |