PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977087.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 277aa    MW: 30054.2 Da    PI: 7.385
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-19124178256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq  +Le+ F++++ +s +++++LA++l+L  rqV vWFqNrRa+ k
  XP_022977087.1 124 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTK 178
                     78889************************************************98 PP

2HD-ZIP_I/II120.96.7e-39124212190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rl+keq+++LE++F+e++ L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++lkeen++L+ke +eL+ +
  XP_022977087.1 124 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCEKLKEENTKLQKELQELK-S 212
                     69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDADCNAGLL LGLGRGLDHH NSMRPLVPDV AGVKKKLQVL KFDDILPSLT LGLSVVVEKS  60
GGESAADDLI HQGSSGSPAS SFSNSSGFKR ERDGGAGEEP AEAEVFMERI SMKVAEEEED  120
GSPRKKLRLT KEQSAVLEDN FKEHSSLSPK QKQDLARQLN LRPRQVEVWF QNRRARTKLK  180
QTEMDCELLK KCCEKLKEEN TKLQKELQEL KSLKLTAPPF CMQLQAATLT VCPSCESSIC  240
GGGGGGGGAD ASPANTFSIG SKPHFLKFPF NHPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173181RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-45HD-ZIP family protein