PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976854.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 171aa    MW: 20130.2 Da    PI: 9.7792
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.39.5e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+snrqvt+skRrngi+KKA+E+ vLCda+v++++f+s+gk++ey+s
  XP_022976854.1  9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCS 59
                    79***********************************************96 PP
2K-box87.42.8e-2971164194
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                     y+k+sgk+l++ak+e+l++e++++kke++n+q e+R+l Ged++sL++keL+ Le++Le++l+ +R+k++el++++  + +++e+e+++ n +L
  XP_022976854.1  71 YHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKELMALEEALENGLTGVREKQSELMKMMRTNERMMEEETKRLNYEL 164
                     8999**************************************************************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AQVSLVVFAS SGKMHEYCSP  60
STPLIDILDK YHKQSGKRLW DAKHENLSNE MDRVKKENDN MQIELRRLRG EDITSLNYKE  120
LMALEEALEN GLTGVREKQS ELMKMMRTNE RMMEEETKRL NYELCSTKRR W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.11e-71MIKC_MADS family protein