PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022976853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 25090.7 Da PI: 9.2808 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.8 | 1.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v++++f+s+gk++ey+s XP_022976853.1 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 88.2 | 1.6e-29 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+k+sgk+l++ak+e+l++e++++kke++n+q e+R+l Ged++sL++keL+ Le++Le++l+ +R+k++el++++ + +++e+e+++ n +L XP_022976853.1 71 YHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKELMALEEALENGLTGVREKQSELMKMMRTNERMMEEETKRLNYELY 165 8999******************************************************************************************9 PP K-box 96 kkl 98 +k XP_022976853.1 166 QKE 168 996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AQVSLVVFAS SGKMHEYCSP 60 STPLIDILDK YHKQSGKRLW DAKHENLSNE MDRVKKENDN MQIELRRLRG EDITSLNYKE 120 LMALEEALEN GLTGVREKQS ELMKMMRTNE RMMEEETKRL NYELYQKEMV AMGDSVREMD 180 NGYNNQRMRD FNSQMPFAFR VQPIQPNLQE RNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-83 | MIKC_MADS family protein |