PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022976817.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 315aa MW: 35539.2 Da PI: 7.7122 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171 | 3.7e-53 | 12 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv++yL kk+++ + + + evd++++ePwd+p+++ + kewyfFs+rd+kyatg r+nrat+sgyWkatgkd++v++k XP_022976817.1 12 LPPGFRFHPRDEELVCDYLMKKINSVCDSS-SLLIEVDLNQCEPWDIPREACVGGKEWYFFSQRDRKYATGLRTNRATASGYWKATGKDRPVFHK 105 79*********************9988666.8899*************8777799**************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++lvg++ktLvfykgrapkg+kt+Wvmhe+rle XP_022976817.1 106 ANQLVGMRKTLVFYKGRAPKGRKTEWVMHEFRLE 139 *******************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MENHISMVEA KLPPGFRFHP RDEELVCDYL MKKINSVCDS SSLLIEVDLN QCEPWDIPRE 60 ACVGGKEWYF FSQRDRKYAT GLRTNRATAS GYWKATGKDR PVFHKANQLV GMRKTLVFYK 120 GRAPKGRKTE WVMHEFRLEG PLSPLKDPPP REDWVLCRMF CKQKEVPARP STGSSSSYSN 180 VAASSSLPAL MDSYLSFHQN RSSYLNEFEQ VPCFSILSQN QTIPSLSNLI QMEPNTGNNI 240 KNFTTMYGGM PNSSTYSSNI DPFSCDSSVL KVVLNNITKM ETNGNPFIGQ PSMGEGSSDS 300 YLSEVGDDIS SLWNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-104 | NAC family protein |