PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976640.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 919aa MW: 101505 Da PI: 5.358

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av + g++Wk+Ia ++ Rt+ qc +rwqk+l XP_022976640.1 37 KGQWTPEEDEILRQAVDHFKGKNWKKIAGCFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	57.2	3.8e-18	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+t a +++ gR +kqc++rw+++l XP_022976640.1 89 KGPWSKEEDEIIIELVNKYGPKKWSTFATHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	48.8	1.6e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022976640.1 141 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MEGDKTISTP SDKPEIRDQR IHALHGRTSG PTRRSTKGQW TPEEDEILRQ AVDHFKGKNW 60 KKIAGCFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTFATHLP 120 GRIGKQCRER WHNHLNPKIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DSYVASGLLT QFQDPIPAGQ PSQLPVSSSK VLGSGNDSGL NGMDTEEISM 240 CSQDPSVADS FMSDSACATL HKREEFQLAE DLELGKEQSI SPVSSSQPYY PPTEVITCPI 300 AEFAQEVGRS LSPSEKNLSD CRTSSNREHQ CDLNEFLYIS SLQLGIEASQ FKAIGTRMGE 360 NHGPSGSAQT SSMIKGAAAS AQAECMFISD DECCRVLFSD AKGDRCDLTS NLKEGSSVSE 420 MCDYKVPVHS FSTPKVGNNH AIASQILNPP PGTDVQEKNS VHQSGMPIPS TVSINNDMIL 480 LGGTGPNQPF VGALEHGCVT SQQNAFAYNG GSSESSYFEV ADNPEMQEQP GGAEDLPKPM 540 CINTFATAAD VTGTCSHSDE RVKQNDEHRD SGALCYEPPR FPSLDVPFFS CDLIQSGSEM 600 MEYSPLGIRQ LMMTSLNSVT PFRLWDSPSR DTSPDAVLKS AAKTFASTPS ILKKRHRDLM 660 SPLSERRIDK KLLTNVTSNL TEEFSRLDVV FNDVSDKRSI EGSAEDKENV YCTFEMREEK 720 KDDGNESRDV TLSENNFSKS SSQDYTKQAT ADTEIVPPRV LAEHDANDLL LHTVEQKPLS 780 SSTRIKKQYS PSRLVDDVSK VSNGNSHGLP CSSPPSICGR PEIDETPFKK SIESPSAWMS 840 PWFFNSFLPG PRIDTEISIE DIGYFSSPKG RSFDGLDAIG LMKQVSELTA AACANAHEVL 900 GNETPETLLK GTRKKHPSP

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MEGDKTISTP SDKPEIRDQR IHALHGRTSG PTRRSTKGQW TPEEDEILRQ AVDHFKGKNW  60
KKIAGCFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTFATHLP  120
GRIGKQCRER WHNHLNPKIN KEAWTQEEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL DSYVASGLLT QFQDPIPAGQ PSQLPVSSSK VLGSGNDSGL NGMDTEEISM  240
CSQDPSVADS FMSDSACATL HKREEFQLAE DLELGKEQSI SPVSSSQPYY PPTEVITCPI  300
AEFAQEVGRS LSPSEKNLSD CRTSSNREHQ CDLNEFLYIS SLQLGIEASQ FKAIGTRMGE  360
NHGPSGSAQT SSMIKGAAAS AQAECMFISD DECCRVLFSD AKGDRCDLTS NLKEGSSVSE  420
MCDYKVPVHS FSTPKVGNNH AIASQILNPP PGTDVQEKNS VHQSGMPIPS TVSINNDMIL  480
LGGTGPNQPF VGALEHGCVT SQQNAFAYNG GSSESSYFEV ADNPEMQEQP GGAEDLPKPM  540
CINTFATAAD VTGTCSHSDE RVKQNDEHRD SGALCYEPPR FPSLDVPFFS CDLIQSGSEM  600
MEYSPLGIRQ LMMTSLNSVT PFRLWDSPSR DTSPDAVLKS AAKTFASTPS ILKKRHRDLM  660
SPLSERRIDK KLLTNVTSNL TEEFSRLDVV FNDVSDKRSI EGSAEDKENV YCTFEMREEK  720
KDDGNESRDV TLSENNFSKS SSQDYTKQAT ADTEIVPPRV LAEHDANDLL LHTVEQKPLS  780
SSTRIKKQYS PSRLVDDVSK VSNGNSHGLP CSSPPSICGR PEIDETPFKK SIESPSAWMS  840
PWFFNSFLPG PRIDTEISIE DIGYFSSPKG RSFDGLDAIG LMKQVSELTA AACANAHEVL  900
GNETPETLLK GTRKKHPSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein