PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976582.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 196aa MW: 22554.9 Da PI: 8.6551

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.4e-19	65	119	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Le+ F++n++++ +++e LA+ l+L+ rqV vWFqNrRa+ k XP_022976582.1 65 RKKLRLTKEQSHLLEQSFRQNHTLNPKQKESLAEVLKLKPRQVEVWFQNRRARSK 119 78889************************************************98 PP
2	HD-ZIP_I/II	115.5	3.1e-37	65	153	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq++lLE+sF+++++L+p++K++la+ L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ l+e+n++L+keveeLr + XP_022976582.1 65 RKKLRLTKEQSHLLEQSFRQNHTLNPKQKESLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKKLQKEVEELR-A 153 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MAVLPTNSSR LDLTISVPGL TSFSSSPLPP SAVRDLDMNR APDEEEWMMG SMEEDEENNS 60 GSHPRKKLRL TKEQSHLLEQ SFRQNHTLNP KQKESLAEVL KLKPRQVEVW FQNRRARSKL 120 KQTEMECEYL KRWFGLLTEQ NKKLQKEVEE LRAMKVAPPT VISPHSCEPL PASNLTMCPR 180 CERVTTTTLD KTRIVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	122	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-78	HD-ZIP family protein