PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976580.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 202aa    MW: 22711.2 Da    PI: 9.123
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.47.6e-4278154278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+++C++dlseak+yhrrhkvCe+hska+vv+v+g++qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++a
  XP_022976580.1  78 CQAHNCTTDLSEAKRYHRRHKVCEFHSKAAVVMVAGIRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKNSA 154
                     **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEAKSYEGKH NLKDKAYREG VVDDDLEYET EEEDVGGGGH GGTNACTALG YYENEKKKRG  60
TAVSGRGRSG VGVSSPSCQA HNCTTDLSEA KRYHRRHKVC EFHSKAAVVM VAGIRQRFCQ  120
QCSRFHELTE FDEAKRSCRR RLAGHNERRR KNSAECQGES TNRKGPASQS KEGQCRQLME  180
DQRTRIQMAP TGSSGYKHLH IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.11e-43SBP family protein