PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976543.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 323aa    MW: 36247.1 Da    PI: 8.2634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.69.8e-53171451128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLkkk+++ +l++  +i+evd+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v++ 
  XP_022976543.1  17 LPPGFRFHPTDEELVVHYLKKKTTSLPLPV-AIIAEVDLYKYDPWELPAKACYGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIAL 110
                     79****************************.88***************7777789*************************************987 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
  XP_022976543.1 111 seGNRKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 145
                     668899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MESSKPAPAI DSDRPNLPPG FRFHPTDEEL VVHYLKKKTT SLPLPVAIIA EVDLYKYDPW  60
ELPAKACYGE EEWYFFSPRD RKYPNGARPN RAATSGYWKA TGTDKPVIAL SEGNRKVGVK  120
KALVFYGGKP PKGIKTNWIM HEYRLADNKP DGGNNKLPEF YIGSKKSSMR LDDWVLCRIY  180
KKTISNKPGV DHELKDCFSY MGDLIPPSIT IHGYNQQMTT TTTTTAAAMN RSVYSELASL  240
SLPTKQRLQP TSSWDEEEYQ SANDQPLSKR LQLMNGGSVD DNNPIAALLS QLPPLQQPTL  300
QGCIVGDGIF RPAIELPETN WYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-97NAC family protein