PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022976315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 842aa MW: 92661 Da PI: 5.8105 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.9e-18 | 22 | 80 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_022976315.1 22 KYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECpilsDIELKQIKVWFQNRRCREKQ 80 5679*****************************************************97 PP | |||||||
2 | START | 177.2 | 1e-55 | 166 | 373 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++ v+e+l+d + W ++++++++l+v+s+g g+++l XP_022976315.1 166 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDWPSWFRDCRAVDVLNVLSTGngGTIELL 259 7899******************************************************.9999999999************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++l+a+++l+p Rdf+ +Ry+ l++g++v++++S++++q+ p+ +++vRae+l Sg+li+p+++g+s +++v+h+dl+ ++++++lr+l+ XP_022976315.1 260 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLSSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 354 *******************************************9988899********************************************* PP HHHHHHHHHHHHHHTXXXX CS START 186 ksglaegaktwvatlqrqc 204 ks++ ++k+++a+l+ ++ XP_022976315.1 355 KSSTLLAQKNTMAALRLLR 373 ***************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 842 aa Download sequence |
MMAVTSACKD SATKISSLDN GKYVRYTPEQ VEALERLYYE CPKPSSMRRQ QLIRECPILS 60 DIELKQIKVW FQNRRCREKQ RKEASRLQTV NRKLTAMNRL LMEENDRLQK QVSQLVYENS 120 YFRQQTQNAT LATTDTSCES VVTSGQQNLT PPHPPKDASP AGLLSIAEET LAEFLSKATG 180 TAVEWVQMPG MKPGPDSIGI VAISHGCTGV AARACGLVGL EPTRVAEILK DWPSWFRDCR 240 AVDVLNVLST GNGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV VCERSLNNTQ 300 NGPSMPPVQN FVRAEMLSSG YLIRPCEGGG SIIHIVDHMD LEPWSVPEVL RPLYKSSTLL 360 AQKNTMAALR LLRQISQEVS QPNVTGWGRR PAALRALSQK LSRGFNEAVN GFTDEGWSLL 420 ENDGIDDVTL LVNMSHGKTM MGANISYSNG FPSMSNAVLC AKASMLLQNV TPAMLIRFLR 480 EHRSEWADSS IDAYSAAAIK TGQCGLPGSH AGTFGGQIIL PLAQTVEHEE FMEVVKFENV 540 SHYRDDKLMP GDIFLLQLCN GVDENTVGTS AELIFAPIDA SFSDDAPILP SGFRIIPLDS 600 GMDASSPYRT LDLASALDVG PAGNRASGNC AGQSGKSKSV MTIAFQFVFD VHLQDNVAAM 660 ARQYVRSVIA SVQRVALALS PSNFSPHANL QTPAGAPEAQ TLALWISQSY RCFMGMELLK 720 NEGRESVLKS LWHHSDAVMC CSLQALPNFT FANQSGLDML ETTLVALQDI TLEKIFDDNG 780 KKTLASEFPR IMEQGFICLQ GGICLSSMGR AISYEKAVAW KVLNEEENAH CICFMFMNWS 840 FV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32880.1 | 0.0 | HD-ZIP family protein |