PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976160.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 456aa MW: 50908.5 Da PI: 6.5895

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.9	1.5e-07	405	438	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022976160.1 405 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 438 469*****************************87 PP
2	ELK	22	3.9e-08	359	380	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+ +Y+++++++++E++ XP_022976160.1 359 ELKHELKSGYKEKIVDIREEIL 380 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MAYHNHLSQD LPLHFSDHQQ HHQNQPLSDT SLRTILPDQL AGGHSSPDPK SHHHHHHHPL 60 QTAPNWLNNA LLRNQNPHSH YSTDTVTTAA AAAANTNFLN LHTTASDSTV SHSSNQWLSR 120 PILHRNHSDV IDDVTASAGD AMIGAATAAL SHDSGEMKND ANSGDGMNKS EGMVMEPSAG 180 GEGVLNWHNA RYKAEILTHP LYEQLLSAHV ACLRIATPVD QLPRIDAQLA QSQNVVAKYS 240 ALTHTAPPPM VGDDKELDQF MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WDIEQSLQSL 300 TGVSPGEGTG ATMSDDEDDQ VDSDANLFDG SLEGPDTMGF GPLIPTESER SLMERVRQEL 360 KHELKSGYKE KIVDIREEIL RKRRAGKLPG DTTSVLKQWW QSHSKWPYPT EEDKARLVQE 420 TGLQLKQINN WFINQRKRNW HNNPSSSTNL KSKRKR

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MAYHNHLSQD LPLHFSDHQQ HHQNQPLSDT SLRTILPDQL AGGHSSPDPK SHHHHHHHPL  60
QTAPNWLNNA LLRNQNPHSH YSTDTVTTAA AAAANTNFLN LHTTASDSTV SHSSNQWLSR  120
PILHRNHSDV IDDVTASAGD AMIGAATAAL SHDSGEMKND ANSGDGMNKS EGMVMEPSAG  180
GEGVLNWHNA RYKAEILTHP LYEQLLSAHV ACLRIATPVD QLPRIDAQLA QSQNVVAKYS  240
ALTHTAPPPM VGDDKELDQF MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WDIEQSLQSL  300
TGVSPGEGTG ATMSDDEDDQ VDSDANLFDG SLEGPDTMGF GPLIPTESER SLMERVRQEL  360
KHELKSGYKE KIVDIREEIL RKRRAGKLPG DTTSVLKQWW QSHSKWPYPT EEDKARLVQE  420
TGLQLKQINN WFINQRKRNW HNNPSSSTNL KSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	436	456	RKRNWHNNPSSSTNLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-179	TALE family protein