PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022975994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27291.1 Da PI: 9.3022 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.4e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKAeEL +LCda+v viifsst+klyeyss XP_022975994.1 10 RIDNSTSRQVTFSKRRSGLLKKAEELAILCDADVGVIIFSSTNKLYEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 84.5 | 2.3e-28 | 80 | 170 | 8 | 98 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + ++++n++L kk+ XP_022975994.1 80 GNSTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSAKDLQNLENQLEISLRGIRMKKEKILMDEIQDLNRKVNLIHQDNTELYKKV 170 3788999*********************************************************************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MGRCKIVIRR IDNSTSRQVT FSKRRSGLLK KAEELAILCD ADVGVIIFSS TNKLYEYSSS 60 SMKTLIERYN KTKEEHHQLG NSTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSA 120 KDLQNLENQL EISLRGIRMK KEKILMDEIQ DLNRKVNLIH QDNTELYKKV NLIRQENLEL 180 HKKVYGTKDA NGAHISSLTN GLSVGEDAGI PIDLQLSQPQ PQDHEAPERA TKLGLQLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G57230.1 | 2e-99 | MIKC_MADS family protein |