PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975993.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27447.3 Da PI: 9.5248

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.6	1.4e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKAeEL +LCda+v viifsst+klyeyss XP_022975993.1 10 RIDNSTSRQVTFSKRRSGLLKKAEELAILCDADVGVIIFSSTNKLYEYSS 59 8***********************************************96 PP
2	K-box	84.4	2.4e-28	80	170	8	98
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + ++++n++L kk+ XP_022975993.1 80 GNSTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSAKDLQNLENQLEISLRGIRMKKEKILMDEIQDLNRKVNLIHQDNTELYKKV 170 3788999*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRCKIVIRR IDNSTSRQVT FSKRRSGLLK KAEELAILCD ADVGVIIFSS TNKLYEYSSS 60 SMKTLIERYN KTKEEHHQLG NSTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSA 120 KDLQNLENQL EISLRGIRMK KEKILMDEIQ DLNRKVNLIH QDNTELYKKV NLIRQENLEL 180 HKKVYGTKDA NGAHISSLTN GLSVGEDAGI PIDLQLSQPQ PQDHEAPERA TKLGRLQLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	2e-99	MIKC_MADS family protein